RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 KLF5Q13887 457 aaPredicted RBP10.1□□□□□ -0.79
BDNF-202ENST00000356660 LY6DQ14210 128 aa10.1□□□□□ -0.79
BDNF-202ENST00000356660 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
BDNF-202ENST00000356660 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
BDNF-202ENST00000356660 HIST1H4GQ99525 98 aa10.1□□□□□ -0.79
BDNF-202ENST00000356660 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
BDNF-202ENST00000356660 ANKRD11Q6UB99 2663 aaPredicted RBP10.09□□□□□ -0.79
BDNF-202ENST00000356660 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
BDNF-202ENST00000356660 TRBV7-9A0A0J9YWB2 115 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 COX8AP10176 69 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 UCNP55089 124 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 MFAP4P55083 255 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 DIAPH2-AS1Q14236 149 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 PATE2Q6UY27 113 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 FOXC2Q99958 501 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 SPXQ9BT56 116 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 FNDC10F2Z333 226 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 EVI2AP22794 236 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 WIPF2Q8TF74 440 aaPredicted RBP10.09□□□□□ -0.79
BDNF-202ENST00000356660 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
BDNF-202ENST00000356660 LOC107984156A0A0G2JMH3 177 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 TMEM213A2RRL7 107 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 HBDP02042 147 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
BDNF-202ENST00000356660 ARL17AQ8IVW1 177 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
BDNF-202ENST00000356660 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
BDNF-202ENST00000356660 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 DSCAML1Q8TD84 2053 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 E7EUB6 86 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 ATP5J2P56134 94 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
BDNF-202ENST00000356660 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 SLC25A48Q6ZT89 311 aaKnown RBP10.08□□□□□ -0.8
BDNF-202ENST00000356660 C16orf92Q96LL3 132 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
BDNF-202ENST00000356660 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 MRPL36Q9P0J6 103 aaKnown RBP10.07□□□□□ -0.8
BDNF-202ENST00000356660 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 SNCGO76070 127 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 MYOZ3Q8TDC0 251 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 NPIPB5A8MRT5 1133 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 WISP2O76076 250 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
BDNF-202ENST00000356660 Q86TA4 180 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 DDB2Q92466 427 aa10.07□□□□□ -0.8
BDNF-202ENST00000356660 K7EMI3 77 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
BDNF-202ENST00000356660 PSG3Q16557 428 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 C8orf46Q8TAG6 207 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 SCRT2Q9NQ03 307 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
BDNF-202ENST00000356660 LEPP41159 167 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
BDNF-202ENST00000356660 TM4SF5O14894 197 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 GAFA1Q96PS6 74 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 COL6A3P12111 3177 aa10.06□□□□□ -0.8
BDNF-202ENST00000356660 K7EP34 96 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 ID1P41134 155 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 IGFL4Q6B9Z1 124 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 RPL7P18124 248 aaKnown RBP10.05□□□□□ -0.8
BDNF-202ENST00000356660 ETDBQ3ZM63 59 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 TMEM167AQ8TBQ9 72 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 K7ERJ3 54 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
BDNF-202ENST00000356660 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 Q8TAT8 98 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 TTTY13Q9BZ97 58 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
BDNF-202ENST00000356660 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 OR9G4Q8NGQ1 327 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 H3BRM9 83 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
BDNF-202ENST00000356660 KLRB1Q12918 225 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms