RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 NPIPB5A8MRT5 1133 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF138P52744 262 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 PSG3Q16557 428 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 PRR31Q5SQ13 230 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF525Q8N782 197 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 VOPP1Q96AW1 172 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 UBE2WQ96B02 151 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 AMELYQ99218 206 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 FASNP49327 2511 aaKnown RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 SOCS1O15524 211 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 KLF5Q13887 457 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 MRPL55Q7Z7F7 128 aaKnown RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM14CQ9P0S9 112 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 USP9YO00507 2555 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 TRGV4A0A0C4DH28 118 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 B5MCH6 92 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 CFHR2P36980 270 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 RCHY1Q96PM5 261 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 KLHDC3Q9BQ90 382 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 TM2D2Q9BX73 214 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 NBR2O15453 112 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 IGHG2P01859 326 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 NHLRC4P0CG21 123 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HILS1P60008 231 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 DAD1P61803 113 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 C9orf153Q5TBE3 101 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 GAGE2AQ6NT46 116 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM75Q8N9X5 138 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 EAF1Q96JC9 268 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 WISP3O95389 354 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 SEC61GP60059 68 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 LINC00305Q7Z4B0 112 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 SPAG8Q99932 426 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM89A2RUT3 159 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 INAFM1C9JVW0 142 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 F8VRH5 84 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 J3KTA2 159 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 INSP01308 110 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 ITLN1Q8WWA0 313 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 RNF125Q96EQ8 232 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HS3ST6Q96QI5 342 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 CCL13Q99616 98 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BLQ99880 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 CHCHD5Q9BSY4 110 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 M0R381 172 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BKO60814 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BJP06899 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BOP23527 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BBP33778 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 FOXG1P55316 489 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BDP58876 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BCP62807 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 FOXE3Q13461 319 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST2H2BEQ16778 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BHQ93079 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BNQ99877 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 HIST1H2BMQ99879 126 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 C20orf141Q9NUB4 165 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 ANAPC10Q9UM13 185 aa2.7□□□□□ -1.98
CSMD3-202ENST00000339701 KMT2BQ9UMN6 2715 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-202ENST00000339701 KNCNA6PVL3 124 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM155Q4W5P6 130 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 SETD2Q9BYW2 2564 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-202ENST00000339701 IGKV3D-15A0A087WSY6 115 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 PGLYRP1O75594 196 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-202ENST00000339701 P2RY4P51582 365 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 LINC01620Q4KN68 170 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF774Q6NX45 483 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 PRSS45Q7RTY3 260 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 C5orf66Q9H5L9 145 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 FAM60AQ9NP50 221 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 PRO1854Q9UHT4 67 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 F6UB75 175 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 BGLAPP02818 100 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 MGPP08493 103 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 WNT5AP41221 380 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF79Q15937 498 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 FAAP20Q6NZ36 180 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 ZAR1Q86SH2 424 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 IGHV3OR15-7A0A075B7D8 119 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 H3BMG7 143 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 YPEL3P61236 119 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-202ENST00000339701 ODF3L1Q8IXM7 274 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 EPDR1Q9UM22 224 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 A0A1B0GWJ7 208 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 MED14OSP0DP75 135 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 PRNTQ86SH4 94 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 H3BUX3 64 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 TRBV12-3P01733 135 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM187Q14656 261 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 TDRG1Q3Y452 100 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 APOHP02749 345 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-202ENST00000339701 CXCL3P19876 107 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 PIK3CD-AS1Q5SR53 167 aa2.69□□□□□ -1.98
CSMD3-202ENST00000339701 MAPK1IP1LQ8NDC0 245 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms