RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RRN3P1Q2M238 152 aa19.24■□□□□ 0.67
SOX1-201ENST00000330949 C5orf64Q2M2E5 130 aa19.24■□□□□ 0.67
SOX1-201ENST00000330949 FAM201AQ5SY85 155 aa19.24■□□□□ 0.67
SOX1-201ENST00000330949 LINC00312Q9Y6C7 94 aa19.24■□□□□ 0.67
SOX1-201ENST00000330949 KALRNO60229 2985 aa19.24■□□□□ 0.67
SOX1-201ENST00000330949 SLC25A39Q9BZJ4 359 aaPredicted RBP19.24■□□□□ 0.67
SOX1-201ENST00000330949 FOXI1Q12951 378 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 SPRNQ5BIV9 151 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 C9orf106Q8NAJ2 232 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 TMEM178AQ8NBL3 297 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 C1orf162Q8NEQ5 155 aaPredicted RBP19.23■□□□□ 0.67
SOX1-201ENST00000330949 FDCSPQ8NFU4 85 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 ATP6V0E2Q8NHE4 81 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 PCNX1Q96RV3 2341 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 C16orf97H3BN30 126 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 LYZP61626 148 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 ZC2HC1BQ5TFG8 222 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 GTSCR1Q86UQ5 136 aa19.23■□□□□ 0.67
SOX1-201ENST00000330949 OR11H12B2RN74 326 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 DPM2O94777 84 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 HCP5Q6MZN7 132 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 CFAP161Q6P656 301 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 SYT8Q8NBV8 401 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 OR11H1Q8NG94 326 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 OR11H2Q8NH07 326 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 PIEZO2Q9H5I5 2752 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 K7EMI3 77 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 MAP1LC3AQ9H492 121 aa19.22■□□□□ 0.67
SOX1-201ENST00000330949 IGLV1-44P01699 117 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 FCER1GP30273 86 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 TWIST1Q15672 202 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 PVRIGQ6DKI7 326 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 Q6ZS92 163 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 C1QTNF4Q9BXJ3 329 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 RIF1Q5UIP0 2472 aaKnown RBP19.21■□□□□ 0.67
SOX1-201ENST00000330949 ASCL2Q99929 193 aa19.21■□□□□ 0.67
SOX1-201ENST00000330949 SMKR1H3BMG3 65 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 TRBV19A0A075B6N1 114 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 ATP5LO75964 103 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 ZNF883P0CG24 379 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 LEPP41159 167 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 CDIP1Q9H305 208 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 LINC01546A6NGU7 62 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 VMA21Q3ZAQ7 101 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 LYPD1Q8N2G4 141 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 GAFA1Q96PS6 74 aa19.2■□□□□ 0.66
SOX1-201ENST00000330949 AGRNO00468 2067 aa19.19■□□□□ 0.66
SOX1-201ENST00000330949 IGHV1-18A0A0C4DH31 117 aa19.19■□□□□ 0.66
SOX1-201ENST00000330949 IGLV2-23P01705 113 aa19.19■□□□□ 0.66
SOX1-201ENST00000330949 LCNL1Q6ZST4 164 aa19.19■□□□□ 0.66
SOX1-201ENST00000330949 PKDREJQ9NTG1 2253 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 TMSB15BA0A087X1C1 80 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 HIST1H4GQ99525 98 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 SCNM1Q9BWG6 230 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 NGBQ9NPG2 151 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 FOXC2Q99958 501 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 RNF7Q9UBF6 113 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 PLXNB1O43157 2135 aa19.18■□□□□ 0.66
SOX1-201ENST00000330949 PRRG2O14669 202 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 CCL13Q99616 98 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 IGHV3-21A0A0B4J1V1 117 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 SPRY3O43610 288 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 SIGLEC15Q6ZMC9 328 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 DEFB108BQ8NET1 73 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 NXT2Q9NPJ8 142 aaKnown RBP19.17■□□□□ 0.66
SOX1-201ENST00000330949 ERG28Q9UKR5 140 aa19.17■□□□□ 0.66
SOX1-201ENST00000330949 TMEM8BA6NDV4 472 aa19.16■□□□□ 0.66
SOX1-201ENST00000330949 MSMPQ1L6U9 139 aa19.16■□□□□ 0.66
SOX1-201ENST00000330949 FAM216BQ8N7L0 139 aa19.16■□□□□ 0.66
SOX1-201ENST00000330949 C8orf49Q96NF6 230 aa19.16■□□□□ 0.66
SOX1-201ENST00000330949 POLEQ07864 2286 aa19.16■□□□□ 0.66
SOX1-201ENST00000330949 TPRP12270 2363 aaKnown RBP19.15■□□□□ 0.66
SOX1-201ENST00000330949 WT1P19544 449 aaPredicted RBP19.15■□□□□ 0.66
SOX1-201ENST00000330949 RAI1Q7Z5J4 1906 aaPredicted RBP19.15■□□□□ 0.66
SOX1-201ENST00000330949 Q6ZUT4 128 aa19.15■□□□□ 0.66
SOX1-201ENST00000330949 K7EM74 188 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 MT-ATP8P03928 68 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 PLA2G2CQ5R387 149 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 TPSG1Q9NRR2 321 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 SH2D1AO60880 128 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 GATA4P43694 442 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 TMEM133Q9H2Q1 129 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 TMEM160Q9NX00 188 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 DKK4Q9UBT3 224 aa19.14■□□□□ 0.65
SOX1-201ENST00000330949 CFAP126Q5VTH2 177 aa19.13■□□□□ 0.65
SOX1-201ENST00000330949 MAPKAPK5-AS1Q8N8E1 139 aa19.13■□□□□ 0.65
SOX1-201ENST00000330949 C17orf77Q96MU5 243 aa19.13■□□□□ 0.65
SOX1-201ENST00000330949 AKAP13Q12802 2813 aa19.13■□□□□ 0.65
SOX1-201ENST00000330949 TACC2O95359 2948 aa19.13■□□□□ 0.65
SOX1-201ENST00000330949 PPIFP30405 207 aaKnown RBP19.12■□□□□ 0.65
SOX1-201ENST00000330949 RNF183Q96D59 192 aa19.12■□□□□ 0.65
SOX1-201ENST00000330949 TRAV40A0A0B4J280 105 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 M0R1B8 84 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 PLGLAQ15195 96 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 RASL11BQ9BPW5 248 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 RPL27AP46776 148 aaKnown RBP19.11■□□□□ 0.65
SOX1-201ENST00000330949 TMEM158Q8WZ71 300 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 DLX4Q92988 240 aaPredicted RBP19.11■□□□□ 0.65
SOX1-201ENST00000330949 SHANK2-AS3Q9BTD1 123 aa19.11■□□□□ 0.65
SOX1-201ENST00000330949 A6NJY4 79 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms