RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 EXOC3-AS1Q8N2X6 119 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 ARL6IP6Q8N6S5 226 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 OR5I1Q13606 314 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 UNQ9165/PRO28630Q6UXU0 137 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 OR11H1Q8NG94 326 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 OR1N2Q8NGR9 330 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 RAX2Q96IS3 184 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 METTL26Q96S19 204 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 TRBV6-1A0A0K0K1D8 114 aa14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 NDUFA4O00483 81 aa14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 HOXD3P31249 432 aaPredicted RBP14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 AAMDCQ9H7C9 122 aa14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 RPH3ALQ9UNE2 315 aa14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 U3KQE9 123 aa14.3□□□□□ -0.12
EXOSC3-201ENST00000327304 A0A087X0K7 114 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 LINC01619G3V211 115 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 SLC17A3O00476 420 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 MGST1P10620 155 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 SLURP1P55000 103 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 NDUFA11Q86Y39 141 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 TMEM158Q8WZ71 300 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 CITED1Q99966 193 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 IL36BQ9NZH7 164 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 SMAD5-AS1Q9Y6J3 95 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 TRAV9-1A0A075B6T8 112 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 LTAP01374 205 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 FAM231DQ6ZW35 169 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 GPHB5Q86YW7 130 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 DPF1Q92782 380 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 V9GYV3 84 aa14.29□□□□□ -0.12
EXOSC3-201ENST00000327304 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 A0A1W2PPQ1 181 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 K7EQM0 130 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 TYMSP04818 313 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 IBA57Q5T440 356 aaKnown RBP14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 ZFP82Q8N141 532 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 MLST8Q9BVC4 326 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 COL6A5A8TX70 2615 aa14.28□□□□□ -0.12
EXOSC3-201ENST00000327304 ZNF320A2RRD8 509 aa14.27□□□□□ -0.12
EXOSC3-201ENST00000327304 SYNJ2BPP57105 145 aa14.27□□□□□ -0.12
EXOSC3-201ENST00000327304 FAM106AQ4KMX7 169 aa14.27□□□□□ -0.12
EXOSC3-201ENST00000327304 TMEM75Q8N9X5 138 aa14.27□□□□□ -0.12
EXOSC3-201ENST00000327304 BIN3Q9NQY0 253 aa14.27□□□□□ -0.12
EXOSC3-201ENST00000327304 CCL24O00175 119 aa14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 MEOX2P50222 304 aa14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 FAM3BP58499 235 aaPredicted RBP14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 FHL3Q13643 280 aa14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 GOLT1AQ6ZVE7 132 aa14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 RNASE7Q9H1E1 156 aaKnown RBP14.27□□□□□ -0.13
EXOSC3-201ENST00000327304 DIRC3C9JPN6 131 aa14.26□□□□□ -0.13
EXOSC3-201ENST00000327304 CSN1S1P47710 185 aa14.26□□□□□ -0.13
EXOSC3-201ENST00000327304 KLF5Q13887 457 aaPredicted RBP14.26□□□□□ -0.13
EXOSC3-201ENST00000327304 NHLRC2Q8NBF2 726 aa14.26□□□□□ -0.13
EXOSC3-201ENST00000327304 STAB1Q9NY15 2570 aa14.26□□□□□ -0.13
EXOSC3-201ENST00000327304 IGLV2-11P01706 119 aa14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 Q86TA4 180 aa14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 TM4SF20Q53R12 229 aa14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 REC114Q7Z4M0 266 aa14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 TMEM183AQ8IXX5 376 aa14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 ZNF331Q9NQX6 463 aaPredicted RBP14.25□□□□□ -0.13
EXOSC3-201ENST00000327304 WNK1Q9H4A3 2382 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 IGHV3-49A0A0A0MS15 119 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 ZNF785A8K8V0 405 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 APOHP02749 345 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 TRGC2P03986 189 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 EDN2P20800 178 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 PSG3Q16557 428 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 SGK494Q96LW2 274 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 SLC50A1Q9BRV3 221 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 ZNF747Q9BV97 191 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 ZFP30Q9Y2G7 519 aa14.24□□□□□ -0.13
EXOSC3-201ENST00000327304 IGHV3OR16-13A0A075B7E8 117 aa14.23□□□□□ -0.13
EXOSC3-201ENST00000327304 IGHV3-74A0A0B4J1X5 117 aa14.23□□□□□ -0.13
EXOSC3-201ENST00000327304 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
EXOSC3-201ENST00000327304 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
EXOSC3-201ENST00000327304 ZNF492Q9P255 531 aa14.23□□□□□ -0.13
EXOSC3-201ENST00000327304 M0R3E3 92 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 LGALS9O00182 355 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 C12orf54Q6X4T0 127 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 DAZ1Q9NQZ3 744 aaKnown RBP14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 UFC1Q9Y3C8 167 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 TRAV8-1A0A0A6YYK1 113 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 TMEM213A2RRL7 107 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 ZNF705GA8MUZ8 300 aaPredicted RBP14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 A8MWP6 167 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 GATCO43716 136 aaKnown RBP14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 S100A6P06703 90 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 C3orf56Q8N813 242 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 NUDT10Q8NFP7 164 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 NUDT11Q96G61 164 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 PSG8Q9UQ74 426 aa14.22□□□□□ -0.13
EXOSC3-201ENST00000327304 A0A1W2PS18 150 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms