RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 GOLT1BQ9Y3E0 138 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 A0A0J9YX75 114 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 RPL7P18124 248 aaKnown RBP10.07□□□□□ -0.8
RPP40-201ENST00000319533 SOHLH1Q5JUK2 328 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 TMEM252Q8N6L7 170 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 OR4B1Q8NGF8 309 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 HSPB11Q9Y547 144 aa10.07□□□□□ -0.8
RPP40-201ENST00000319533 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 COX7A2P2O60397 106 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 HBE1P02100 147 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
RPP40-201ENST00000319533 CAMLGP49069 296 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
RPP40-201ENST00000319533 BAXQ07812 192 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 ZNF345Q14585 488 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 FAM78BQ5VT40 261 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 Q6ZRG5 221 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 TMUB2Q71RG4 321 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 UHRF2Q96PU4 802 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 MGST2Q99735 147 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 ARV1Q9H2C2 271 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
RPP40-201ENST00000319533 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
RPP40-201ENST00000319533 F6UB75 175 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 NHLH2Q02577 135 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 ATP6V1FQ16864 119 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 LINC00305Q7Z4B0 112 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 ZNF575Q86XF7 245 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 C17orf77Q96MU5 243 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 SLC25A31Q9H0C2 315 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 WFDC1Q9HC57 220 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
RPP40-201ENST00000319533 C1orf134Q5TEV5 83 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 INO80EQ8NBZ0 244 aaPredicted RBP10.04□□□□□ -0.8
RPP40-201ENST00000319533 LRRC20Q8TCA0 184 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 C20orf173Q96LM9 149 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 SMIM3Q9BZL3 60 aa10.04□□□□□ -0.8
RPP40-201ENST00000319533 BCL2L11O43521 198 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 MPDU1O75352 247 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 HTN3P15516 51 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 DAD1P61803 113 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 OPCMLQ14982 345 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 C10orf113Q5VZT2 155 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 PFDN5Q99471 154 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 CYTL1Q9NRR1 136 aa10.03□□□□□ -0.8
RPP40-201ENST00000319533 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
RPP40-201ENST00000319533 A0A087X0K7 114 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 A0A0D9SG52 128 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 FGF7P21781 194 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
RPP40-201ENST00000319533 B2MP61769 119 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 BPIFA4PQ86YQ2 179 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 DNAJC4Q9NNZ3 241 aa10.02□□□□□ -0.81
RPP40-201ENST00000319533 LYRM9A8MSI8 78 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 CRXO43186 299 aaPredicted RBP10.01□□□□□ -0.81
RPP40-201ENST00000319533 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
RPP40-201ENST00000319533 IFITM2Q01629 132 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 CLINT1Q14677 625 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 IGFL4Q6B9Z1 124 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 ZNF738Q8NE65 137 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
RPP40-201ENST00000319533 TRAV8-2A0A0B4J237 113 aa10□□□□□ -0.81
RPP40-201ENST00000319533 TSPOP30536 169 aa10□□□□□ -0.81
RPP40-201ENST00000319533 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
RPP40-201ENST00000319533 LCN15Q6UWW0 184 aa10□□□□□ -0.81
RPP40-201ENST00000319533 ARPC5LQ9BPX5 153 aa10□□□□□ -0.81
RPP40-201ENST00000319533 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
RPP40-201ENST00000319533 KCNIP2Q9NS61 270 aa10□□□□□ -0.81
RPP40-201ENST00000319533 PXMP4Q9Y6I8 212 aa10□□□□□ -0.81
RPP40-201ENST00000319533 KANTRA0A1W2PQU2 76 aa9.99□□□□□ -0.81
RPP40-201ENST00000319533 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
RPP40-201ENST00000319533 CNN1P51911 297 aaKnown RBP9.99□□□□□ -0.81
RPP40-201ENST00000319533 ZNRF2Q8NHG8 242 aa9.99□□□□□ -0.81
RPP40-201ENST00000319533 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
RPP40-201ENST00000319533 TMEM208Q9BTX3 173 aa9.99□□□□□ -0.81
RPP40-201ENST00000319533 PLAC8L1A1L4L8 177 aa9.98□□□□□ -0.81
RPP40-201ENST00000319533 ZNF705GA8MUZ8 300 aaPredicted RBP9.98□□□□□ -0.81
RPP40-201ENST00000319533 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
RPP40-201ENST00000319533 INSP01308 110 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms