RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 Q6ZRG5 221 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 ZNF767PQ75MW2 155 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 OR4B1Q8NGF8 309 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 PPP1R14BQ96C90 147 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
FOXR1-201ENST00000317011 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 ARV1Q9H2C2 271 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
FOXR1-201ENST00000317011 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 HYPMO75409 117 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 SLC51BQ86UW2 128 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 C16orf92Q96LL3 132 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
FOXR1-201ENST00000317011 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
FOXR1-201ENST00000317011 H3BRN7 92 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 S100A7P31151 101 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 C10orf113Q5VZT2 155 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 OR2G3Q8NGZ4 309 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
FOXR1-201ENST00000317011 SLC25A22Q9H936 323 aa11.08□□□□□ -0.64
FOXR1-201ENST00000317011 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
FOXR1-201ENST00000317011 RAB2AP61019 212 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 PATE2Q6UY27 113 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 PFDN5Q99471 154 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 NDUFAF3Q9BU61 184 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
FOXR1-201ENST00000317011 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
FOXR1-201ENST00000317011 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 ACOT6Q3I5F7 207 aaPredicted RBP11.06□□□□□ -0.64
FOXR1-201ENST00000317011 FAM222AQ5U5X8 452 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 LINC00305Q7Z4B0 112 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 TMED6Q8WW62 240 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 DNAJC4Q9NNZ3 241 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 PLA2G2EQ9NZK7 142 aa11.06□□□□□ -0.64
FOXR1-201ENST00000317011 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 A0A087X0K7 114 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 MRPS12O15235 138 aaKnown RBP11.05□□□□□ -0.64
FOXR1-201ENST00000317011 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
FOXR1-201ENST00000317011 SEC11BP0C7V7 166 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 P0DMU3 169 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 RPL7P18124 248 aaKnown RBP11.05□□□□□ -0.64
FOXR1-201ENST00000317011 CNN1P51911 297 aaKnown RBP11.05□□□□□ -0.64
FOXR1-201ENST00000317011 SERF2P84101 59 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 IGFL4Q6B9Z1 124 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 FAM122CQ6P4D5 195 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 KIAA1109Q2LD37 5005 aa11.05□□□□□ -0.64
FOXR1-201ENST00000317011 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.64
FOXR1-201ENST00000317011 HBE1P02100 147 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 M6PRP20645 277 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 EMP1P54849 157 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 RRN3P1Q2M238 152 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 MORN5Q5VZ52 161 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 OR10G4Q8NGN3 311 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 OR10G9Q8NGN4 311 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 OR10G7Q8NGN6 311 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
FOXR1-201ENST00000317011 LOC102723971A0A1B0GUV8 181 aa11.03□□□□□ -0.64
FOXR1-201ENST00000317011 MBP02144 154 aa11.03□□□□□ -0.64
FOXR1-201ENST00000317011 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
FOXR1-201ENST00000317011 LINC00336Q6ZUF6 198 aa11.03□□□□□ -0.64
FOXR1-201ENST00000317011 MIR17HGQ75NE6 70 aa11.03□□□□□ -0.64
FOXR1-201ENST00000317011 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
FOXR1-201ENST00000317011 YTHDF2Q9Y5A9 579 aaKnown RBP11.03□□□□□ -0.64
FOXR1-201ENST00000317011 TRAV5A0A0B4J249 113 aa11.02□□□□□ -0.65
FOXR1-201ENST00000317011 TSPOP30536 169 aa11.02□□□□□ -0.65
FOXR1-201ENST00000317011 RHOBP62745 196 aa11.02□□□□□ -0.65
FOXR1-201ENST00000317011 ALKAL2Q6UX46 152 aa11.02□□□□□ -0.65
FOXR1-201ENST00000317011 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
FOXR1-201ENST00000317011 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
FOXR1-201ENST00000317011 PKHD1P08F94 4074 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
FOXR1-201ENST00000317011 PRM2P04554 102 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 CDC34P49427 236 aaPredicted RBP11.01□□□□□ -0.65
FOXR1-201ENST00000317011 PSG3Q16557 428 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 LGALS9BQ3B8N2 356 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 FAM74A1Q5RGS3 127 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 OR8A1Q8NGG7 326 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
FOXR1-201ENST00000317011 PKD1P98161 4303 aa11□□□□□ -0.65
FOXR1-201ENST00000317011 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
FOXR1-201ENST00000317011 UMAD1C9J7I0 102 aa11□□□□□ -0.65
FOXR1-201ENST00000317011 M0R2Z0 102 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms