RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 ZNF320A2RRD8 509 aa12.34□□□□□ -0.43
TUBB3-201ENST00000315491 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
TUBB3-201ENST00000315491 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
TUBB3-201ENST00000315491 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
TUBB3-201ENST00000315491 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
TUBB3-201ENST00000315491 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
TUBB3-201ENST00000315491 SLURP1P55000 103 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 KCNIP4Q6PIL6 250 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 S100A7AQ86SG5 101 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 METTL26Q96S19 204 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 CITED1Q99966 193 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 H3BRN7 92 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 CCL24O00175 119 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF207O43670 478 aaKnown RBP12.33□□□□□ -0.44
TUBB3-201ENST00000315491 FHL3Q13643 280 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 MORN5Q5VZ52 161 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
TUBB3-201ENST00000315491 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
TUBB3-201ENST00000315491 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 C8orf88P0DMB2 117 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 NPPCP23582 126 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 S100A7P31151 101 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 MEF2BQ02080 365 aaPredicted RBP12.32□□□□□ -0.44
TUBB3-201ENST00000315491 KLF5Q13887 457 aaPredicted RBP12.32□□□□□ -0.44
TUBB3-201ENST00000315491 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 TECRQ9NZ01 308 aaKnown RBP12.32□□□□□ -0.44
TUBB3-201ENST00000315491 UFC1Q9Y3C8 167 aa12.32□□□□□ -0.44
TUBB3-201ENST00000315491 K7EMT4 169 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 LGALS9O00182 355 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 CRYBB3P26998 211 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 TAS2R45P59539 299 aa12.31□□□□□ -0.44
TUBB3-201ENST00000315491 A0A1W2PPQ1 181 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-201ENST00000315491 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-201ENST00000315491 LEMD1Q68G75 181 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 DAZ1Q9NQZ3 744 aaKnown RBP12.3□□□□□ -0.44
TUBB3-201ENST00000315491 MYCNOSP40205 109 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 PSMB3P49720 205 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 PAFAH1B2P68402 229 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 TM4SF20Q53R12 229 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 U3KQE9 123 aa12.3□□□□□ -0.44
TUBB3-201ENST00000315491 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-201ENST00000315491 ESDP10768 282 aa12.29□□□□□ -0.44
TUBB3-201ENST00000315491 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF747Q9BV97 191 aa12.29□□□□□ -0.44
TUBB3-201ENST00000315491 PARLQ9H300 379 aa12.29□□□□□ -0.44
TUBB3-201ENST00000315491 RNF24Q9Y225 148 aa12.29□□□□□ -0.44
TUBB3-201ENST00000315491 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
TUBB3-201ENST00000315491 SETD2Q9BYW2 2564 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-201ENST00000315491 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 TMEM213A2RRL7 107 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 BUB3O43684 328 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 CXorf1O96002 111 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 ARL14EPLP0DKL9 152 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 COL5A1-AS1Q5SY13 56 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 C12orf54Q6X4T0 127 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 OR7C2O60412 319 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 TMEM183BQ1AE95 376 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 PEMTQ9UBM1 199 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 TRAPPC1Q9Y5R8 145 aa12.28□□□□□ -0.44
TUBB3-201ENST00000315491 A0A1W2PS18 150 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 EDN2P20800 178 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 COTL1Q14019 142 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 OR9G4Q8NGQ1 327 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 RPUSD4Q96CM3 377 aaKnown RBP12.27□□□□□ -0.45
TUBB3-201ENST00000315491 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 AURKAIP1Q9NWT8 199 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-201ENST00000315491 SMPXQ9UHP9 88 aa12.27□□□□□ -0.45
TUBB3-201ENST00000315491 C2orf70A6NJV1 201 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 PYYP10082 97 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 GCHFRP30047 84 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 GRAMD2BQ96HH9 432 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 RHPN1-AS1Q9BWJ2 59 aa12.26□□□□□ -0.45
TUBB3-201ENST00000315491 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms