RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 Q9UFV3 132 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 EMP1P54849 157 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 URB1-AS1Q96HZ7 61 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 NGBQ9NPG2 151 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 FOXC2Q99958 501 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 NDUFA3O95167 84 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 RBX1P62877 108 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 RABAC1Q9UI14 185 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 A1L4Q6 167 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 FAM90A9PA6NNJ1 464 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 IGLV1-44P01699 117 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 Q86TA4 180 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 MRPL27Q9P0M9 148 aaKnown RBP11.57□□□□□ -0.56
PTPN9-201ENST00000306726 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
PTPN9-201ENST00000306726 LY96Q9Y6Y9 160 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 GTSF1LQ9H1H1 148 aa11.57□□□□□ -0.56
PTPN9-201ENST00000306726 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 HTN1P15515 57 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.56□□□□□ -0.56
PTPN9-201ENST00000306726 HIVEP3Q5T1R4 2406 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 NDPQ00604 133 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 AMTNQ6UX39 209 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 DEFB1P60022 68 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 KIR3DS1Q14943 382 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
PTPN9-201ENST00000306726 SIGLEC9Q9Y336 463 aa11.56□□□□□ -0.56
PTPN9-201ENST00000306726 GRNP28799 593 aaKnown RBP11.55□□□□□ -0.56
PTPN9-201ENST00000306726 RHOGP84095 191 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 RNASE6Q93091 150 aaKnown RBP11.55□□□□□ -0.56
PTPN9-201ENST00000306726 IGLV3-9A0A075B6K5 115 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 H7C2G1 150 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 LEPP41159 167 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 MEF2CQ06413 473 aaPredicted RBP11.55□□□□□ -0.56
PTPN9-201ENST00000306726 GTF2H5Q6ZYL4 71 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 C8orf46Q8TAG6 207 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 TMEM178BH3BS89 294 aa11.55□□□□□ -0.56
PTPN9-201ENST00000306726 SRD5A1P18405 259 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 UBTD1Q9HAC8 227 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 M0R381 172 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 MGPP08493 103 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
PTPN9-201ENST00000306726 MC5RP33032 325 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 FAM162BQ5T6X4 162 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 IGHV1-3A0A0C4DH29 117 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 LHBP01229 141 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 ESDP10768 282 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
PTPN9-201ENST00000306726 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
PTPN9-201ENST00000306726 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 ZNF843Q8N446 348 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 AGRNO00468 2067 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 CGB3P0DN86 165 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 CGB7P0DN87 165 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 OR2K2Q8NGT1 345 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 A0A0G2JLM5 398 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 NPYP01303 97 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 ZNF502Q8TBZ5 544 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 VGLL1Q99990 258 aa11.53□□□□□ -0.56
PTPN9-201ENST00000306726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.52□□□□□ -0.56
PTPN9-201ENST00000306726 A6NDN8 102 aa11.52□□□□□ -0.56
PTPN9-201ENST00000306726 TOMM40O96008 361 aa11.52□□□□□ -0.56
PTPN9-201ENST00000306726 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.56
PTPN9-201ENST00000306726 ORMDL3Q8N138 153 aa11.52□□□□□ -0.56
PTPN9-201ENST00000306726 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.57
PTPN9-201ENST00000306726 SH2D1AO60880 128 aa11.52□□□□□ -0.57
PTPN9-201ENST00000306726 SPANXN1Q5VSR9 72 aa11.52□□□□□ -0.57
PTPN9-201ENST00000306726 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 GNLYP22749 145 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
PTPN9-201ENST00000306726 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 LGALS7P47929 136 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
PTPN9-201ENST00000306726 CD3EP07766 207 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 FAM71F2Q6NXP2 309 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 OTORQ9NRC9 128 aa11.51□□□□□ -0.57
PTPN9-201ENST00000306726 FABP2P12104 132 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 PSG3Q16557 428 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
PTPN9-201ENST00000306726 ZNF747Q9BV97 191 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms