RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
SHCBP1-201ENST00000303383 GCN1Q92616 2671 aaKnown RBP11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 ITPR2Q14571 2701 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 LTAP01374 205 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 CFHR3Q02985 330 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 PSG8Q9UQ74 426 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 ACANP16112 2415 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 NDUFA6P56556 154 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 SERTM2A0A1B0GWG4 89 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 SPINK4O60575 86 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 P01737 135 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 CT45A10P0DMU9 189 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 PSMB8P28062 276 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 PSG3Q16557 428 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
SHCBP1-201ENST00000303383 MYO9AB2RTY4 2548 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 GBGT1Q8N5D6 347 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 CD5LO43866 347 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 ZNF253O75346 499 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
SHCBP1-201ENST00000303383 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 RPLP1P05386 114 aaKnown RBP11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 FAM231DQ6ZW35 169 aa11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 ZNF331Q9NQX6 463 aaPredicted RBP11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 ELANEP08246 267 aa11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 SCGB2A2Q13296 93 aa11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 GOLT1BQ9Y3E0 138 aa11.15□□□□□ -0.62
SHCBP1-201ENST00000303383 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 CHEK1O14757 476 aa11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 TRGC1P0CF51 173 aa11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 FABP9Q0Z7S8 132 aa11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 KHDC1LQ5JSQ8 128 aa11.15□□□□□ -0.63
SHCBP1-201ENST00000303383 TYMSP04818 313 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 C16orf92Q96LL3 132 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 A0A087X0K7 114 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 FOXE3Q13461 319 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 NDFIP1Q9BT67 221 aa11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
SHCBP1-201ENST00000303383 ASCL2Q99929 193 aa11.13□□□□□ -0.63
SHCBP1-201ENST00000303383 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
SHCBP1-201ENST00000303383 NBPF19A0A087WUL8 3843 aa11.13□□□□□ -0.63
SHCBP1-201ENST00000303383 ZNF705FA8MVS1 300 aaPredicted RBP11.13□□□□□ -0.63
SHCBP1-201ENST00000303383 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
SHCBP1-201ENST00000303383 IGKV3-7A0A075B6H7 116 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 A8MWL6 223 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 RBX1P62877 108 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 U3KQE9 123 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 ZNF492Q9P255 531 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 ZFHX3Q15911 3703 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 ZNF25P17030 456 aaPredicted RBP11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
SHCBP1-201ENST00000303383 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 OR2D3Q8NGH3 330 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 SNURFLB1AK76 121 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 TSKUQ8WUA8 353 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms