RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 A8MTW9 85 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 TEX46H3BTG2 121 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 HBE1P02100 147 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
RFX3-201ENST00000302303 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
RFX3-201ENST00000302303 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
RFX3-201ENST00000302303 CD81P60033 236 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 PSG9Q00887 426 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 DEFB125Q8N687 156 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 LINC00052Q96N35 136 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 RARRES2Q99969 163 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 OTORQ9NRC9 128 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 ARL2-SNX15V9GYD0 113 aa7.01□□□□□ -1.29
RFX3-201ENST00000302303 A0A0J9YX75 114 aa7□□□□□ -1.29
RFX3-201ENST00000302303 RBMY1BA6NDE4 496 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 RBMY1EA6NEQ0 496 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 KNCNA6PVL3 124 aa7□□□□□ -1.29
RFX3-201ENST00000302303 OR11H12B2RN74 326 aa7□□□□□ -1.29
RFX3-201ENST00000302303 RBMY1DP0C7P1 496 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 GNG5P63218 68 aa7□□□□□ -1.29
RFX3-201ENST00000302303 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 SAMD13Q5VXD3 122 aa7□□□□□ -1.29
RFX3-201ENST00000302303 LINC00322Q6ZN03 302 aaPredicted RBP7□□□□□ -1.29
RFX3-201ENST00000302303 IQCF2Q8IXL9 164 aa7□□□□□ -1.29
RFX3-201ENST00000302303 RPUSD4Q96CM3 377 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 MRPL53Q96EL3 112 aaKnown RBP7□□□□□ -1.29
RFX3-201ENST00000302303 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
RFX3-201ENST00000302303 AURKAIP1Q9NWT8 199 aaPredicted RBP7□□□□□ -1.29
RFX3-201ENST00000302303 AGRNO00468 2067 aa7□□□□□ -1.29
RFX3-201ENST00000302303 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
RFX3-201ENST00000302303 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 DIRC3C9JPN6 131 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 C9JQL5 133 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 H3BMM0 161 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 K7EIL1 84 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 IGLV2-11P01706 119 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 ID1P41134 155 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 SNRPD3P62318 126 aaKnown RBP6.99□□□□□ -1.29
RFX3-201ENST00000302303 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 ARL6IP6Q8N6S5 226 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 OR8A1Q8NGG7 326 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 FAM210AQ96ND0 272 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 CLEC5AQ9NY25 188 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 EPDR1Q9UM22 224 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 PRELID1Q9Y255 219 aa6.99□□□□□ -1.29
RFX3-201ENST00000302303 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
RFX3-201ENST00000302303 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
RFX3-201ENST00000302303 GIG44P09565 113 aaPredicted RBP6.98□□□□□ -1.29
RFX3-201ENST00000302303 BCL2P10415 239 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 ERCC8Q13216 396 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 HAGHQ16775 308 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 FOXI2Q6ZQN5 318 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 TRPT1Q86TN4 253 aaKnown RBP6.98□□□□□ -1.29
RFX3-201ENST00000302303 ZNF738Q8NE65 137 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 FAM19A4Q96LR4 140 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 VGLL1Q99990 258 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 MANBALQ9NQG1 85 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
RFX3-201ENST00000302303 TRAV8-1A0A0A6YYK1 113 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 RBFOX3A6NFN3 312 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 A8MZ25 164 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 TCRAP04437 139 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 SLC25A5P05141 298 aaKnown RBP6.97□□□□□ -1.29
RFX3-201ENST00000302303 IGHV4-30-4P0DP06 118 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 PPT1P50897 306 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 CNN1P51911 297 aaKnown RBP6.97□□□□□ -1.29
RFX3-201ENST00000302303 CMC4P56277 68 aaPredicted RBP6.97□□□□□ -1.29
RFX3-201ENST00000302303 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 CST9LP1Q5W188 147 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 C9orf47Q6ZRZ4 202 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 C5orf17Q8NAS9 161 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 C2CD4CQ8TF44 421 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 AAMDCQ9H7C9 122 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 VAX2Q9UIW0 290 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 KLF12Q9Y4X4 402 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
RFX3-201ENST00000302303 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 C11orf94C9JXX5 98 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 CT45A10P0DMU9 189 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 MEF2BQ02080 365 aaPredicted RBP6.96□□□□□ -1.29
RFX3-201ENST00000302303 ACTL10Q5JWF8 245 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 RXFP4Q8TDU9 374 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 C11orf52Q96A22 123 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 ASCL2Q99929 193 aa6.96□□□□□ -1.29
RFX3-201ENST00000302303 NKX6-2Q9C056 277 aaPredicted RBP6.96□□□□□ -1.29
RFX3-201ENST00000302303 ZMAT5Q9UDW3 170 aaKnown RBP6.96□□□□□ -1.29
RFX3-201ENST00000302303 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.29
RFX3-201ENST00000302303 TRAV34A0A0B4J273 112 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 RBAKDNA6NC62 111 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 KIR3DS1Q14943 382 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms