RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
UBXN1-202ENST00000301935 TENM2Q9NT68 2774 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 RBFOX3A6NFN3 312 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 PAGE4O60829 102 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 NDUFB4O95168 129 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 BCL2P10415 239 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
UBXN1-202ENST00000301935 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
UBXN1-202ENST00000301935 PCNPQ8WW12 178 aaKnown RBP11.3□□□□□ -0.6
UBXN1-202ENST00000301935 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
UBXN1-202ENST00000301935 F6UZH7 168 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 K7EQG2 157 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 FRMD6-AS1P0C7T7 363 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 CSN1S1P47710 185 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 PEA15Q15121 130 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 CST9LP1Q5W188 147 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
UBXN1-202ENST00000301935 Q9H3A6 140 aa11.29□□□□□ -0.6
UBXN1-202ENST00000301935 LCE6AA0A183 80 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 PGPA6NDG6 321 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 SOCS3O14543 225 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 PDE6DO43924 150 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 UBE2G2P60604 165 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
UBXN1-202ENST00000301935 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
UBXN1-202ENST00000301935 PSG3Q16557 428 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 ZMAT4Q9H898 229 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 SORL1Q92673 2214 aa11.28□□□□□ -0.6
UBXN1-202ENST00000301935 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 C11orf94C9JXX5 98 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 ICAM4Q14773 271 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 GUCA2BQ16661 112 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 HAGHQ16775 308 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 UQCC3Q6UW78 93 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 HIST1H2BAQ96A08 127 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
UBXN1-202ENST00000301935 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.61
UBXN1-202ENST00000301935 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
UBXN1-202ENST00000301935 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 H3BTX0 84 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 K7EQM0 130 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 SLC17A3O00476 420 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
UBXN1-202ENST00000301935 SNRPCP09234 159 aaKnown RBP11.26□□□□□ -0.61
UBXN1-202ENST00000301935 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 CCDC28AQ8IWP9 274 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 EIF4E3Q8N5X7 224 aaKnown RBP11.26□□□□□ -0.61
UBXN1-202ENST00000301935 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
UBXN1-202ENST00000301935 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
UBXN1-202ENST00000301935 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
UBXN1-202ENST00000301935 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
UBXN1-202ENST00000301935 TFPI2P48307 235 aa11.25□□□□□ -0.61
UBXN1-202ENST00000301935 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
UBXN1-202ENST00000301935 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
UBXN1-202ENST00000301935 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
UBXN1-202ENST00000301935 IZUMO1RA6ND01 250 aa11.24□□□□□ -0.61
UBXN1-202ENST00000301935 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
UBXN1-202ENST00000301935 RARRES2Q99969 163 aa11.24□□□□□ -0.61
UBXN1-202ENST00000301935 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
UBXN1-202ENST00000301935 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
UBXN1-202ENST00000301935 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 ATP5G3P48201 142 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 CD81P60033 236 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 COMMD7Q86VX2 200 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
UBXN1-202ENST00000301935 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 ZNF688P0C7X2 276 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
UBXN1-202ENST00000301935 OR11H12B2RN74 326 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 PEX7O00628 323 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 TCRAP04437 139 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 PSMG4Q5JS54 123 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
UBXN1-202ENST00000301935 M0R3E3 92 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
UBXN1-202ENST00000301935 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms