RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 C9orf106Q8NAJ2 232 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 SMPXQ9UHP9 88 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 LINC00312Q9Y6C7 94 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 TRGV1A0A0A0MS02 117 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 PAX8Q06710 450 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 COL4A5P29400 1685 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 SYNJ2BPP57105 145 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 TMEM200BQ69YZ2 307 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 SCN10AQ9Y5Y9 1956 aa6.47□□□□□ -1.37
CLTC-201ENST00000269122 HOXD3P31249 432 aaPredicted RBP6.46□□□□□ -1.37
CLTC-201ENST00000269122 Q0VG73 95 aa6.46□□□□□ -1.37
CLTC-201ENST00000269122 C6orf226Q5I0X4 101 aa6.46□□□□□ -1.37
CLTC-201ENST00000269122 CACNA1EQ15878 2313 aa6.46□□□□□ -1.37
CLTC-201ENST00000269122 APOBEC3AP31941 199 aaPredicted RBP6.46□□□□□ -1.37
CLTC-201ENST00000269122 TMEM14EPQ6UXP3 125 aa6.46□□□□□ -1.37
CLTC-201ENST00000269122 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
CLTC-201ENST00000269122 PVRIGQ6DKI7 326 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 CD177Q8N6Q3 437 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 CARD19Q96LW7 228 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 LIME1Q9H400 295 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 C7orf69Q9H7B7 122 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 LYL1P12980 280 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 QRFPP83859 136 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 HCFC1P51610 2035 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 PCNX3Q9H6A9 2034 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 WIPF2Q8TF74 440 aaPredicted RBP6.46□□□□□ -1.38
CLTC-201ENST00000269122 PLEKHB2Q96CS7 222 aa6.46□□□□□ -1.38
CLTC-201ENST00000269122 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.38
CLTC-201ENST00000269122 LINC00271P0C7V0 271 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 FAM168AQ92567 244 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 K7EN84 100 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 GAGE7O76087 117 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 GAGE12FP0CL80 117 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 GAGE12GP0CL81 117 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 GAGE12IP0CL82 117 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 ATP5IP56385 69 aaPredicted RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 ARHGAP32A7KAX9 2087 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 IGLV3-21P80748 117 aaPredicted RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 WFDC2Q14508 124 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 ANKRD29Q8N6D5 301 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 SIGLEC8Q9NYZ4 499 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 SPRR3Q9UBC9 169 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 V9GYV3 84 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 KIF26AQ9ULI4 1882 aaPredicted RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 CLPSL1A2RUU4 121 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 CFHR1Q03591 330 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 NTN5Q8WTR8 489 aaPredicted RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 KLK9Q9UKQ9 250 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 NCOA6Q14686 2063 aaPredicted RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 TRAV26-1A0A087WT03 109 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 IGHV1-18A0A0C4DH31 117 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 MAPK1IP1LQ8NDC0 245 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 IGLC7A0M8Q6 106 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 NXPH4O95158 308 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 C12orf74Q32Q52 190 aa6.45□□□□□ -1.38
CLTC-201ENST00000269122 PNRC2Q9NPJ4 139 aaKnown RBP6.45□□□□□ -1.38
CLTC-201ENST00000269122 LY6HO94772 140 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 VDAC2P45880 294 aaPredicted RBP6.44□□□□□ -1.38
CLTC-201ENST00000269122 C10orf91Q5T1B1 145 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 SLC50A1Q9BRV3 221 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 ZNF106Q9H2Y7 1883 aaKnown RBP6.44□□□□□ -1.38
CLTC-201ENST00000269122 VCYO14598 125 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 Q86TA4 180 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 C2orf16Q68DN1 1984 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 C17orf100A8MU93 164 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 SOCS3O14543 225 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 SRSF7Q16629 238 aaKnown RBP eCLIP6.44□□□□□ -1.387e-7■□□□□ 9.4
CLTC-201ENST00000269122 ZIC4Q8N9L1 334 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 TRAV12-2A0A075B6T6 113 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 DAD1P61803 113 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 TMEM131Q92545 1883 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 IGHV4-4A0A075B6R2 117 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 UCNP55089 124 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 CACNA1GO43497 2377 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 ALPK3Q96L96 1907 aa6.44□□□□□ -1.38
CLTC-201ENST00000269122 B9A039 149 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 ANAPC1Q9H1A4 1944 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 PRR14LQ5THK1 2151 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 TRAV41A0A0B4J266 112 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 TMEM75Q8N9X5 138 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 TNCP24821 2201 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 GOLGB1Q14789 3259 aaKnown RBP6.43□□□□□ -1.38
CLTC-201ENST00000269122 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 VGLL1Q99990 258 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 PAX9P55771 341 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 SPATA25Q9BR10 227 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 MSRB2Q9Y3D2 182 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 IGFBPL1Q8WX77 278 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 RPL32P62910 135 aaKnown RBP6.43□□□□□ -1.38
CLTC-201ENST00000269122 VMO1Q7Z5L0 202 aa6.43□□□□□ -1.38
CLTC-201ENST00000269122 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms