RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 Q6ZR54 194 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 BPIFA4PQ86YQ2 179 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 TMEM256Q8N2U0 113 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 C12orf45Q8N5I9 185 aaPredicted RBP6.86□□□□□ -1.31
VPS41-201ENST00000265745 C2orf50Q96LR7 162 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 SEC22CQ9BRL7 303 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
VPS41-201ENST00000265745 LSM5Q9Y4Y9 91 aaKnown RBP6.86□□□□□ -1.31
VPS41-201ENST00000265745 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 FAM24AA6NFZ4 105 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 PRAC2D3DTV9 90 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 H3BQ15 152 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 IGLC2P0DOY2 106 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 CDKN1BP46527 198 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 CAMLGP49069 296 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 BCAP31P51572 246 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 RAB32Q13637 225 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 OPCMLQ14982 345 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 FCN2Q15485 313 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 C10orf113Q5VZT2 155 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 MIC13Q5XKP0 118 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 Q6ZRG5 221 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 NRARPQ7Z6K4 114 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 SAT2Q96F10 170 aaPredicted RBP6.85□□□□□ -1.31
VPS41-201ENST00000265745 SLC50A1Q9BRV3 221 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 CCDC32Q9BV29 185 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 UQCC1Q9NVA1 299 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 WDR83OSQ9Y284 106 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 DNAH2Q9P225 4427 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
VPS41-201ENST00000265745 IGLV2-18A0A075B6J9 118 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 CBY3A6NI87 242 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 H3BTX0 84 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 SLC17A3O00476 420 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 HTN1P15515 57 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 S100A11P31949 105 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 VWC2Q2TAL6 325 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
VPS41-201ENST00000265745 LYRM2Q9NU23 88 aaPredicted RBP6.84□□□□□ -1.31
VPS41-201ENST00000265745 FAM240BA0A1B0GVZ2 78 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 IGSF23A1L1A6 192 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 F5H768 121 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 H7BYZ3 331 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 PVALBP20472 110 aaPredicted RBP6.83□□□□□ -1.32
VPS41-201ENST00000265745 RPL29P47914 159 aaKnown RBP6.83□□□□□ -1.32
VPS41-201ENST00000265745 SULT1A1P50225 295 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
VPS41-201ENST00000265745 GUK1Q16774 197 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 LINC00299Q6ZSB3 139 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 TMEM252Q8N6L7 170 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 OR1L4Q8NGR5 311 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 OR10J6PQ8NGY7 276 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 RNASE8Q8TDE3 154 aaKnown RBP6.83□□□□□ -1.32
VPS41-201ENST00000265745 C16orf74Q96GX8 76 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 SLC39A9Q9NUM3 307 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 TIMM8BQ9Y5J9 83 aaPredicted RBP6.83□□□□□ -1.32
VPS41-201ENST00000265745 PXMP4Q9Y6I8 212 aa6.83□□□□□ -1.32
VPS41-201ENST00000265745 A0A087WWL8 130 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 ATP5G1P05496 136 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 CT45A10P0DMU9 189 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 ATP5G3P48201 142 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 S100A10P60903 97 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 STX12Q86Y82 276 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
VPS41-201ENST00000265745 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
VPS41-201ENST00000265745 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
VPS41-201ENST00000265745 ZNF586Q9NXT0 402 aa6.82□□□□□ -1.32
VPS41-201ENST00000265745 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 TRBV19A0A075B6N1 114 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 UBE2L5PA0A1B0GUS4 154 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 ZNF253O75346 499 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 HBG1P69891 147 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 HBG2P69892 147 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 ASAH1Q13510 395 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 ATP6V1FQ16864 119 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 GFI1BQ5VTD9 330 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 LINC00612Q8N6U2 182 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 ODF3Q96PU9 254 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 PFDN5Q99471 154 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 TMEM14CQ9P0S9 112 aa6.81□□□□□ -1.32
VPS41-201ENST00000265745 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 NDUFB4O95168 129 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 NUDT3O95989 172 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 BAXQ07812 192 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 C1orf134Q5TEV5 83 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
VPS41-201ENST00000265745 ATG101Q9BSB4 218 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms