RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 I3L2K1 104 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 ATP5IP56385 69 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 ZNF329Q86UD4 541 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 IGF2BP2-AS1Q96M15 143 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 FBN2P35556 2912 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 FNDC10F2Z333 226 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 FXYD7P58549 80 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 PGLYRP4Q96LB8 373 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 C7orf69Q9H7B7 122 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 A0A1W2PRE2 83 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 VWC2LB2RUY7 222 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
TRAFD1-201ENST00000257604 HELZ2Q9BYK8 2649 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 FOXE3Q13461 319 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 TRGV9Q99603 122 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 ODF3BA8MYP8 253 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 COX11Q9Y6N1 276 aa11.5□□□□□ -0.57
TRAFD1-201ENST00000257604 C15orf32Q32M92 178 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 NPFFO15130 113 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 NUDT3O95989 172 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 ZNF562Q6V9R5 426 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 HECTD1Q9ULT8 2610 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 CLEC3BP05452 202 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 FANCD2OSQ96PS1 177 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
TRAFD1-201ENST00000257604 TMEM238C9JI98 176 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 UBE2V1Q13404 147 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 CRYGCP07315 174 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 MFAP4P55083 255 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 RHOGP84095 191 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 SMIM15Q7Z3B0 74 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
TRAFD1-201ENST00000257604 Q8N9W7 124 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 A0A087X0K7 114 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 OR4C46A6NHA9 309 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 UBE2E1P51965 193 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 NF1P21359 2839 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 ZNF491Q8N8L2 437 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
TRAFD1-201ENST00000257604 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
TRAFD1-201ENST00000257604 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.57
TRAFD1-201ENST00000257604 HIF1ANQ9NWT6 349 aa11.46□□□□□ -0.57
TRAFD1-201ENST00000257604 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.58
TRAFD1-201ENST00000257604 C1RLQ9NZP8 487 aa11.46□□□□□ -0.58
TRAFD1-201ENST00000257604 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
TRAFD1-201ENST00000257604 J3KRW8 73 aa11.45□□□□□ -0.58
TRAFD1-201ENST00000257604 THYN1Q9P016 225 aa11.45□□□□□ -0.58
TRAFD1-201ENST00000257604 H3BUX3 64 aa11.45□□□□□ -0.58
TRAFD1-201ENST00000257604 GP9P14770 177 aa11.45□□□□□ -0.58
TRAFD1-201ENST00000257604 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 COX19Q49B96 90 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 MRPS16Q9Y3D3 137 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 NDUFA3O95167 84 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 FSTL3O95633 263 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 STXBP6Q8NFX7 210 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 NPBQ8NG41 125 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 RNF5Q99942 180 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 CIDEAO60543 219 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 TCRAP04437 139 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 CDKN1BP46527 198 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 Q8TAT8 98 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 MBD6Q96DN6 1003 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 GRAMD2BQ96HH9 432 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 FLNAP21333 2647 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-201ENST00000257604 IGKV2-40A0A087WW87 121 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 ZNF785A8K8V0 405 aa11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 IGKV2D-40P01614 121 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 BLCAPP62952 87 aa11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms