RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ATP5G3P48201 142 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 CMC4P56277 68 aaPredicted RBP9.75□□□□□ -0.85
LSM8-201ENST00000249299 SLC7A5P1Q8MH63 180 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 COL6A5A8TX70 2615 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 RBAKDNA6NC62 111 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 K7EQG2 157 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
LSM8-201ENST00000249299 SLC17A3O00476 420 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 SLC25A5P05141 298 aaKnown RBP9.74□□□□□ -0.85
LSM8-201ENST00000249299 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
LSM8-201ENST00000249299 SRSF3P84103 164 aaKnown RBP9.74□□□□□ -0.85
LSM8-201ENST00000249299 SOHLH1Q5JUK2 328 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 C9orf66Q5T8R8 295 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 FAM110AQ9BQ89 295 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 SEC11CQ9BY50 192 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 KLF12Q9Y4X4 402 aa9.74□□□□□ -0.85
LSM8-201ENST00000249299 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 TRBV6-1A0A0K0K1D8 114 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 PEX7O00628 323 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 TCRAP04437 139 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 EDN2P20800 178 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 TAS2R60P59551 318 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 PSG3Q16557 428 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 LCN12Q6JVE5 192 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 CYB561D1Q8N8Q1 229 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 C2CD4CQ8TF44 421 aa9.73□□□□□ -0.85
LSM8-201ENST00000249299 C9JQL5 133 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 SAP30O75446 220 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 SFTA3P0C7M3 94 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 S100A1P23297 94 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 CNN1P51911 297 aaKnown RBP9.72□□□□□ -0.85
LSM8-201ENST00000249299 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 CD300EQ496F6 205 aaPredicted RBP9.72□□□□□ -0.85
LSM8-201ENST00000249299 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 TMEM61Q8N0U2 210 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
LSM8-201ENST00000249299 WNK1Q9H4A3 2382 aa9.71□□□□□ -0.85
LSM8-201ENST00000249299 DIRC3C9JPN6 131 aa9.71□□□□□ -0.86
LSM8-201ENST00000249299 H3BTX0 84 aa9.71□□□□□ -0.86
LSM8-201ENST00000249299 SNRPCP09234 159 aaKnown RBP9.71□□□□□ -0.86
LSM8-201ENST00000249299 TMEM183BQ1AE95 376 aa9.71□□□□□ -0.86
LSM8-201ENST00000249299 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.86
LSM8-201ENST00000249299 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
LSM8-201ENST00000249299 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
LSM8-201ENST00000249299 SCO2A0A1W2PP80 73 aa9.7□□□□□ -0.86
LSM8-201ENST00000249299 C9JCJ5 164 aa9.7□□□□□ -0.86
LSM8-201ENST00000249299 AKR1C3P42330 323 aa9.7□□□□□ -0.86
LSM8-201ENST00000249299 PARLQ9H300 379 aa9.7□□□□□ -0.86
LSM8-201ENST00000249299 ZMAT5Q9UDW3 170 aaKnown RBP9.7□□□□□ -0.86
LSM8-201ENST00000249299 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
LSM8-201ENST00000249299 LENEPQ9Y5L5 61 aa9.7□□□□□ -0.86
LSM8-201ENST00000249299 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 F8W036 122 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 M0R3E3 92 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 GHRHP01286 108 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
LSM8-201ENST00000249299 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 SMIM7Q9BQ49 75 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
LSM8-201ENST00000249299 STAB1Q9NY15 2570 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 RPL35P42766 123 aaKnown RBP9.68□□□□□ -0.86
LSM8-201ENST00000249299 UBE2G1P62253 170 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 PRR31Q5SQ13 230 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 C9orf47Q6ZRZ4 202 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 GOLT1AQ6ZVE7 132 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 ZNF738Q8NE65 137 aa9.68□□□□□ -0.86
LSM8-201ENST00000249299 IGKV3-7A0A075B6H7 116 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 ATP6V1G1O75348 118 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 TMEM241Q24JQ0 296 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 SAPCD1Q5SSQ6 148 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 RNF182Q8N6D2 247 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 OR10J6PQ8NGY7 276 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 CLUHP3Q96NS8 147 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 BIN3Q9NQY0 253 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 NAT8Q9UHE5 227 aa9.67□□□□□ -0.86
LSM8-201ENST00000249299 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
LSM8-201ENST00000249299 LTAP01374 205 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 IGLV2-11P01706 119 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 GNG4P50150 75 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 GNG5P63218 68 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 FLI1Q01543 452 aaPredicted RBP9.66□□□□□ -0.86
LSM8-201ENST00000249299 EBLN2Q6P2I7 272 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 WFDC3Q8IUB2 231 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms