RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SIPA1L1O43166 1804 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 COL11A2P13942 1736 aaPredicted RBP6.68□□□□□ -1.34
APOB-201ENST00000233242 IGHV3OR16-8A0A075B7F1 116 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 SPAARA0A1B0GVQ0 90 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 CCL25O15444 150 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 IGHV1-8P0DP01 117 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 PLAURQ03405 335 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 FHL1Q13642 323 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 PRADC1Q9BSG0 188 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 TSC2P49815 1807 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 VOPP1Q96AW1 172 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 EFNA2O43921 213 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 CFHR2P36980 270 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 SLC25A16P16260 332 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 CFHR1Q03591 330 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 CSPG4Q6UVK1 2322 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 RHODO00212 210 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 C1orf122Q6ZSJ8 110 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 GGNQ86UU5 652 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 SIGLEC9Q9Y336 463 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 FAM223BA6NKX1 122 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 ZNF726P1Q15940 193 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 C2orf66Q6UXQ4 117 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 FAM223AQ8IWN6 122 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 IGHV1-3A0A0C4DH29 117 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 PAX9P55771 341 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 FGFBP3Q8TAT2 258 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 C1orf147Q96MC9 270 aaPredicted RBP6.67□□□□□ -1.34
APOB-201ENST00000233242 CD177Q8N6Q3 437 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 PTPN13Q12923 2485 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 PLXNA3P51805 1871 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 BDP1A6H8Y1 2624 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 XIRP1Q702N8 1843 aaKnown RBP6.67□□□□□ -1.34
APOB-201ENST00000233242 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
APOB-201ENST00000233242 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 TRAV41A0A0B4J266 112 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 ANKRD29Q8N6D5 301 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 C9orf106Q8NAJ2 232 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 F8WEM9 126 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 Q8TAT8 98 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 THSD7AQ9UPZ6 1657 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 TRBV19A0A075B6N1 114 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 SIGLEC8Q9NYZ4 499 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 STHQ8IWL8 128 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 ZSWIM8A7E2V4 1837 aa6.67□□□□□ -1.34
APOB-201ENST00000233242 H3BMG7 143 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 FAM27E3Q08E93 113 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 CCL19Q99731 98 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 FGF6P10767 208 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 STPG1Q5TH74 334 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 CYYR1Q96J86 154 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 CLPSP04118 112 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 FXYD7P58549 80 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 DOPEY1Q5JWR5 2465 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 M0R1W7 72 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 HELZP42694 1942 aaKnown RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 IGKV1-6A0A0C4DH72 117 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 NPYP01303 97 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 WNT2P09544 360 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 J3KT08 172 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 TCF15Q12870 199 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 RCHY1Q96PM5 261 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 NTN3O00634 580 aaPredicted RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 LMO1P25800 156 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 MCRIP2Q9BUT9 160 aaKnown RBP6.66□□□□□ -1.34
APOB-201ENST00000233242 HAPLN4Q86UW8 402 aa6.66□□□□□ -1.34
APOB-201ENST00000233242 COX6B1P14854 86 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 TMEM200BQ69YZ2 307 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 ZNF474Q6S9Z5 364 aaPredicted RBP6.65□□□□□ -1.34
APOB-201ENST00000233242 LINC00479Q96M42 142 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 IGHV1-18A0A0C4DH31 117 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 IGHV3-11P01762 117 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 COLCA1Q6ZS62 124 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 FDCSPQ8NFU4 85 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 FAM168AQ92567 244 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 CARD19Q96LW7 228 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 TP53TG1Q9Y2A0 90 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 NDUFA4L2Q9NRX3 87 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 KLRD1Q13241 179 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 ZNF747Q9BV97 191 aa6.65□□□□□ -1.34
APOB-201ENST00000233242 A0A087WX48 190 aa6.65□□□□□ -1.35
APOB-201ENST00000233242 SPXQ9BT56 116 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms