RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 APOC4P55056 127 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 RPUSD4Q96CM3 377 aaKnown RBP17.38■□□□□ 0.37
HOMER3-201ENST00000221222 CLUHP3Q96NS8 147 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 AAMDCQ9H7C9 122 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 PRELID1Q9Y255 219 aa17.38■□□□□ 0.37
HOMER3-201ENST00000221222 RAB5CP51148 216 aa17.36■□□□□ 0.37
HOMER3-201ENST00000221222 EXOC3-AS1Q8N2X6 119 aa17.36■□□□□ 0.37
HOMER3-201ENST00000221222 ASCL2Q99929 193 aa17.36■□□□□ 0.37
HOMER3-201ENST00000221222 TMEM167BQ9NRX6 74 aa17.36■□□□□ 0.37
HOMER3-201ENST00000221222 BOLA1Q9Y3E2 137 aa17.36■□□□□ 0.37
HOMER3-201ENST00000221222 MAP1LC3B2A6NCE7 125 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 A8MTW9 85 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
HOMER3-201ENST00000221222 RANP62826 216 aaKnown RBP17.35■□□□□ 0.37
HOMER3-201ENST00000221222 FAM213BQ8TBF2 198 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 MBD3L1Q8WWY6 194 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 MAP1LC3BQ9GZQ8 125 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 CSTL1Q9H114 145 aa17.35■□□□□ 0.37
HOMER3-201ENST00000221222 BOLA2-SMG1P6H3BVE0 249 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 M0R3E3 92 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 UBE2CO00762 179 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 SULT1A2P50226 295 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 ICAM4Q14773 271 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 MORN3Q6PF18 240 aaPredicted RBP17.34■□□□□ 0.37
HOMER3-201ENST00000221222 OR8A1Q8NGG7 326 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 TM2D3Q9BRN9 247 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 Q9H3A6 140 aa17.34■□□□□ 0.37
HOMER3-201ENST00000221222 DUSP14O95147 198 aaKnown RBP17.33■□□□□ 0.36
HOMER3-201ENST00000221222 NHLRC4P0CG21 123 aaPredicted RBP17.33■□□□□ 0.36
HOMER3-201ENST00000221222 PRAC2D3DTV9 90 aa17.32■□□□□ 0.36
HOMER3-201ENST00000221222 CNN1P51911 297 aaKnown RBP17.32■□□□□ 0.36
HOMER3-201ENST00000221222 FGF8P55075 233 aaPredicted RBP17.32■□□□□ 0.36
HOMER3-201ENST00000221222 OTORQ9NRC9 128 aa17.32■□□□□ 0.36
HOMER3-201ENST00000221222 ZNF705DP0CH99 300 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-201ENST00000221222 ZNF705BP0CI00 300 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-201ENST00000221222 NUTF2P61970 127 aaKnown RBP17.31■□□□□ 0.36
HOMER3-201ENST00000221222 OR4B1Q8NGF8 309 aa17.31■□□□□ 0.36
HOMER3-201ENST00000221222 HIST1H1AQ02539 215 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-201ENST00000221222 Q6ZWC4 215 aa17.3■□□□□ 0.36
HOMER3-201ENST00000221222 TMPRSS5Q9H3S3 457 aa17.3■□□□□ 0.36
HOMER3-201ENST00000221222 KMT2CQ8NEZ4 4911 aaKnown RBP17.3■□□□□ 0.36
HOMER3-201ENST00000221222 TENM3Q9P273 2699 aa17.3■□□□□ 0.36
HOMER3-201ENST00000221222 IGKV3-20P01619 116 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 GIG44P09565 113 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-201ENST00000221222 H2AFB1P0C5Y9 115 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 FAM74A1Q5RGS3 127 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 AMTNQ6UX39 209 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 IQCF2Q8IXL9 164 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 OR10J6PQ8NGY7 276 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 SFT2D1Q8WV19 159 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 SPATA25Q9BR10 227 aa17.29■□□□□ 0.36
HOMER3-201ENST00000221222 PGPA6NDG6 321 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 CA1P00915 261 aaPredicted RBP17.28■□□□□ 0.36
HOMER3-201ENST00000221222 PRB4P10163 310 aaPredicted RBP17.28■□□□□ 0.36
HOMER3-201ENST00000221222 ARL6IP6Q8N6S5 226 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 RXFP4Q8TDU9 374 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 A0A1W2PRE2 83 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 NPIPB6E9PJ23 425 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 CSN1S1P47710 185 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 ALKAL2Q6UX46 152 aa17.28■□□□□ 0.36
HOMER3-201ENST00000221222 TRAV1-1A0A0B4J248 108 aa17.27■□□□□ 0.35
HOMER3-201ENST00000221222 WWC2-AS2Q96NR7 200 aa17.27■□□□□ 0.35
HOMER3-201ENST00000221222 ZMAT4Q9H898 229 aa17.27■□□□□ 0.35
HOMER3-201ENST00000221222 TP53TG1Q9Y2A0 90 aa17.27■□□□□ 0.35
HOMER3-201ENST00000221222 DEFB135Q30KP9 77 aa17.26■□□□□ 0.35
HOMER3-201ENST00000221222 C1QTNF4Q9BXJ3 329 aa17.26■□□□□ 0.35
HOMER3-201ENST00000221222 SLC35B3Q9H1N7 401 aa17.26■□□□□ 0.35
HOMER3-201ENST00000221222 GGTLC3B5MD39 225 aa17.25■□□□□ 0.35
HOMER3-201ENST00000221222 DIRC3C9JPN6 131 aa17.25■□□□□ 0.35
HOMER3-201ENST00000221222 CMTM2Q8TAZ6 248 aa17.25■□□□□ 0.35
HOMER3-201ENST00000221222 RNF183Q96D59 192 aa17.25■□□□□ 0.35
HOMER3-201ENST00000221222 ARL2-SNX15V9GYD0 113 aa17.25■□□□□ 0.35
HOMER3-201ENST00000221222 RBAKDNA6NC62 111 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 FAM74A7A6NL05 159 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 C9orf47Q6ZRZ4 202 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 C5orf17Q8NAS9 161 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 CSNK1G2-AS1Q8NCQ2 148 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 NKX6-2Q9C056 277 aaPredicted RBP17.24■□□□□ 0.35
HOMER3-201ENST00000221222 RETNQ9HD89 108 aa17.24■□□□□ 0.35
HOMER3-201ENST00000221222 YTHDF2Q9Y5A9 579 aaKnown RBP17.24■□□□□ 0.35
HOMER3-201ENST00000221222 IGKV2-40A0A087WW87 121 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-201ENST00000221222 IGKV2D-40P01614 121 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-201ENST00000221222 SLC25A5P05141 298 aaKnown RBP17.23■□□□□ 0.35
HOMER3-201ENST00000221222 SUMO1P63165 101 aaKnown RBP17.23■□□□□ 0.35
HOMER3-201ENST00000221222 LINC00477Q96M19 166 aa17.23■□□□□ 0.35
HOMER3-201ENST00000221222 RCHY1Q96PM5 261 aa17.23■□□□□ 0.35
HOMER3-201ENST00000221222 ODF3Q96PU9 254 aa17.23■□□□□ 0.35
HOMER3-201ENST00000221222 OVOL2Q9BRP0 275 aa17.23■□□□□ 0.35
HOMER3-201ENST00000221222 XCL2Q9UBD3 114 aa17.23■□□□□ 0.35
HOMER3-201ENST00000221222 A0A1B0GV50 99 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 ZNF705EA8MWA4 302 aaPredicted RBP17.22■□□□□ 0.35
HOMER3-201ENST00000221222 TEX46H3BTG2 121 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 SPRY2O43597 315 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 HBE1P02100 147 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 AMBPP02760 352 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 FXYD7P58549 80 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 UBE2G2P60604 165 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 AGPAT4-IT1Q9H0P7 198 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 PPP1R14DQ9NXH3 145 aa17.22■□□□□ 0.35
HOMER3-201ENST00000221222 HUWE1Q7Z6Z7 4374 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms