RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 OR5B12Q96R08 314 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 METTL26Q96S19 204 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 ELOVL1Q9BW60 279 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 AAMDCQ9H7C9 122 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 YTHDF2Q9Y5A9 579 aaKnown RBP13.29□□□□□ -0.28
PHGDH-234ENST00000642041 GP9P14770 177 aa13.28□□□□□ -0.28
PHGDH-234ENST00000642041 SAMD13Q5VXD3 122 aa13.28□□□□□ -0.28
PHGDH-234ENST00000642041 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
PHGDH-234ENST00000642041 Q8N2B8 174 aa13.28□□□□□ -0.28
PHGDH-234ENST00000642041 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-234ENST00000642041 SCO1O75880 301 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 OR10J4P0C629 311 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 NPPCP23582 126 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 GPR183P32249 361 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 AKR1C3P42330 323 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 GALR1P47211 349 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 RPL23P62829 140 aaKnown RBP13.27□□□□□ -0.29
PHGDH-234ENST00000642041 BLCAPP62952 87 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 FOXE3Q13461 319 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 KCNIP4Q6PIL6 250 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
PHGDH-234ENST00000642041 DYNC2H1Q8NCM8 4307 aaKnown RBP13.27□□□□□ -0.29
PHGDH-234ENST00000642041 TRAV9-1A0A075B6T8 112 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 TRAV5A0A0B4J249 113 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 TRBV6-1A0A0K0K1D8 114 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
PHGDH-234ENST00000642041 PF4V1P10720 104 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 MYCNOSP40205 109 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 CSN1S1P47710 185 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 GNG4P50150 75 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 CFHR3Q02985 330 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 ADIRFQ15847 76 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 OR8I2Q8N0Y5 310 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 ATG101Q9BSB4 218 aa13.26□□□□□ -0.29
PHGDH-234ENST00000642041 SACSQ9NZJ4 4579 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 PGPA6NDG6 321 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 LINC01548A6NM66 108 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 H7BYZ3 331 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 ARL3P36405 182 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 UBE2G1P62253 170 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 TMEM183BQ1AE95 376 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 FAM106AQ4KMX7 169 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 LINC01551Q86U37 167 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 KLF12Q9Y4X4 402 aa13.25□□□□□ -0.29
PHGDH-234ENST00000642041 TRBV19A0A075B6N1 114 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 A0A087X0K7 114 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 K7EMT4 169 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 PEX7O00628 323 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
PHGDH-234ENST00000642041 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 PYYP10082 97 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 FOLR2P14207 255 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 ATF4P18848 351 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-234ENST00000642041 CRYBB3P26998 211 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 ADMP35318 185 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 RPL35P42766 123 aaKnown RBP13.24□□□□□ -0.29
PHGDH-234ENST00000642041 RANP62826 216 aaKnown RBP13.24□□□□□ -0.29
PHGDH-234ENST00000642041 TOMM20LQ6UXN7 152 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 RNF152Q8N8N0 203 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 CCDC140Q96MF4 163 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 C20orf24Q9BUV8 137 aa13.24□□□□□ -0.29
PHGDH-234ENST00000642041 GGTLC3B5MD39 225 aa13.23□□□□□ -0.29
PHGDH-234ENST00000642041 PSMB8P28062 276 aa13.23□□□□□ -0.29
PHGDH-234ENST00000642041 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-234ENST00000642041 Q9H3A6 140 aa13.23□□□□□ -0.29
PHGDH-234ENST00000642041 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
PHGDH-234ENST00000642041 EIF3GO75821 320 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHGDH-234ENST00000642041 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 ISOC2Q96AB3 205 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 UBE2E2Q96LR5 201 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 ZFAND3Q9H8U3 227 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
PHGDH-234ENST00000642041 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 ISLRO14498 428 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 BUB3O43684 328 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 KIAA0141Q14154 515 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-234ENST00000642041 COX19Q49B96 90 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 BLNKQ8WV28 456 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
PHGDH-234ENST00000642041 SFRP2Q96HF1 295 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 ZNF414Q96IQ9 312 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 OSTCQ9NRP0 149 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 U3KQE9 123 aa13.21□□□□□ -0.29
PHGDH-234ENST00000642041 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms