RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 BPIFA4PQ86YQ2 179 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF738Q8NE65 137 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 LRRC20Q8TCA0 184 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 PFDN5Q99471 154 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 X6R8D5 127 aa12.57□□□□□ -0.4
PHGDH-227ENST00000641811 H3BQ15 152 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF709Q8N972 641 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 ATP5SQ99766 215 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 WDR61Q9GZS3 305 aaKnown RBP12.56□□□□□ -0.4
PHGDH-227ENST00000641811 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
PHGDH-227ENST00000641811 IGHV4-28A0A0C4DH34 117 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF705EA8MWA4 302 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-227ENST00000641811 SLC17A3O00476 420 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
PHGDH-227ENST00000641811 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 PSG9Q00887 426 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
PHGDH-227ENST00000641811 PSG3Q16557 428 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 Q8NAQ8 132 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
PHGDH-227ENST00000641811 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
PHGDH-227ENST00000641811 IGLC2P0DOY2 106 aa12.54□□□□□ -0.4
PHGDH-227ENST00000641811 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
PHGDH-227ENST00000641811 Q5BKY6 102 aa12.54□□□□□ -0.4
PHGDH-227ENST00000641811 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
PHGDH-227ENST00000641811 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF331Q9NQX6 463 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-227ENST00000641811 A8MTW9 85 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 OXA1LQ15070 435 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 MFFQ9GZY8 342 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 HRH4Q9H3N8 390 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
PHGDH-227ENST00000641811 IGHV3OR16-12A0A075B7B8 117 aa12.52□□□□□ -0.41
PHGDH-227ENST00000641811 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-227ENST00000641811 MIFP14174 115 aa12.52□□□□□ -0.41
PHGDH-227ENST00000641811 CXCL2P19875 107 aa12.52□□□□□ -0.41
PHGDH-227ENST00000641811 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
PHGDH-227ENST00000641811 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.41
PHGDH-227ENST00000641811 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-227ENST00000641811 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.41
PHGDH-227ENST00000641811 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
PHGDH-227ENST00000641811 IFNA5P01569 189 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 PYYP10082 97 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-227ENST00000641811 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 C11orf45Q8TAV5 145 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
PHGDH-227ENST00000641811 PRAC2D3DTV9 90 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 M0R2Z0 102 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 GIPP09681 153 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-227ENST00000641811 SPINK13Q1W4C9 94 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 ZNF705AQ6ZN79 300 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-227ENST00000641811 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 TMEM14CQ9P0S9 112 aa12.5□□□□□ -0.41
PHGDH-227ENST00000641811 RHOBP62745 196 aa12.49□□□□□ -0.41
PHGDH-227ENST00000641811 GUK1Q16774 197 aa12.49□□□□□ -0.41
PHGDH-227ENST00000641811 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
PHGDH-227ENST00000641811 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
PHGDH-227ENST00000641811 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
PHGDH-227ENST00000641811 NDUFB4O95168 129 aa12.48□□□□□ -0.41
PHGDH-227ENST00000641811 HIST1H1EP10412 219 aaKnown RBP12.48□□□□□ -0.41
PHGDH-227ENST00000641811 CEMP1Q6PRD7 247 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-227ENST00000641811 PHLDA1Q8WV24 401 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-227ENST00000641811 BLNKQ8WV28 456 aa12.48□□□□□ -0.41
PHGDH-227ENST00000641811 LCE6AA0A183 80 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-227ENST00000641811 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 IGF2BP2-AS1Q96M15 143 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-227ENST00000641811 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
PHGDH-227ENST00000641811 DYNC2H1Q8NCM8 4307 aaKnown RBP12.46□□□□□ -0.41
PHGDH-227ENST00000641811 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 NUPR2A6NF83 97 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 BOLA2-SMG1P6H3BVE0 249 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.41
PHGDH-227ENST00000641811 NEU1Q99519 415 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 MRPL32Q9BYC8 188 aaKnown RBP12.46□□□□□ -0.41
PHGDH-227ENST00000641811 PPP1R14DQ9NXH3 145 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.41
PHGDH-227ENST00000641811 RYR3Q15413 4870 aa12.46□□□□□ -0.42
PHGDH-227ENST00000641811 FXYD6-FXYD2A0A087WZ82 144 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 M0R3E3 92 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 ZNF253O75346 499 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 AMBPP02760 352 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 PRM2P04554 102 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 347.3 ms