RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FAM231DQ6ZW35 169 aa13.34□□□□□ -0.27
PHGDH-208ENST00000641023 FOXC2Q99958 501 aa13.34□□□□□ -0.27
PHGDH-208ENST00000641023 PRSS22Q9GZN4 317 aa13.34□□□□□ -0.27
PHGDH-208ENST00000641023 ZNF320A2RRD8 509 aa13.33□□□□□ -0.27
PHGDH-208ENST00000641023 ZNF253O75346 499 aa13.33□□□□□ -0.27
PHGDH-208ENST00000641023 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.27
PHGDH-208ENST00000641023 NPFFR1Q9GZQ6 430 aa13.33□□□□□ -0.27
PHGDH-208ENST00000641023 SERTAD4Q9NUC0 356 aa13.33□□□□□ -0.27
PHGDH-208ENST00000641023 IGHV3-11P01762 117 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 IGHG4P01861 327 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 CSN1S1P47710 185 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 SNRPEP62304 92 aaKnown RBP13.33□□□□□ -0.28
PHGDH-208ENST00000641023 TMEM95Q3KNT9 176 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 MLST8Q9BVC4 326 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 TEX15Q9BXT5 2789 aa13.33□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF705GA8MUZ8 300 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-208ENST00000641023 NDUFA4O00483 81 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 PRR27Q6MZM9 219 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 ARL6IP6Q8N6S5 226 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 SMAD5-AS1Q9Y6J3 95 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF469Q96JG9 3925 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-208ENST00000641023 TMEM89A2RUT3 159 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 C5orf52A6NGY3 159 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF785A8K8V0 405 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 FAM209BQ5JX69 171 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 TMEM75Q8N9X5 138 aa13.32□□□□□ -0.28
PHGDH-208ENST00000641023 TRAV8-1A0A0A6YYK1 113 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 TRBV6-1A0A0K0K1D8 114 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 SERTM2A0A1B0GWG4 89 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 DIRC3C9JPN6 131 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 M0R3E3 92 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 TRBV12-3P01733 135 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 PSMB8P28062 276 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 RPL19P84098 196 aaKnown RBP13.31□□□□□ -0.28
PHGDH-208ENST00000641023 CCDC168Q8NDH2 2452 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 ITPR3Q14573 2671 aa13.31□□□□□ -0.28
PHGDH-208ENST00000641023 A0A087X0K7 114 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 IGLV2-11P01706 119 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 Q86TA4 180 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 U3KQE9 123 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 GATCO43716 136 aaKnown RBP13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BKO60814 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BJP06899 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BOP23527 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BBP33778 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 SLC35B1P78383 322 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 PSG3Q16557 428 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-208ENST00000641023 FRZBQ92765 325 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 ZFP30Q9Y2G7 519 aa13.3□□□□□ -0.28
PHGDH-208ENST00000641023 IGHV3-66A0A0C4DH42 116 aa13.29□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
PHGDH-208ENST00000641023 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-208ENST00000641023 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
PHGDH-208ENST00000641023 MEOX2P50222 304 aa13.29□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-208ENST00000641023 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 SIGLECL1Q8N7X8 197 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 SMIM27A0A1W2PRY6 76 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 PHOX2AO14813 284 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF702PQ9H963 129 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
PHGDH-208ENST00000641023 PSG8Q9UQ74 426 aa13.28□□□□□ -0.28
PHGDH-208ENST00000641023 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 IL17RELQ6ZVW7 336 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 ZNF492Q9P255 531 aa13.27□□□□□ -0.28
PHGDH-208ENST00000641023 IGHV3-49A0A0A0MS15 119 aa13.27□□□□□ -0.29
PHGDH-208ENST00000641023 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
PHGDH-208ENST00000641023 UBE2CO00762 179 aa13.27□□□□□ -0.29
PHGDH-208ENST00000641023 TRAPPC1Q9Y5R8 145 aa13.27□□□□□ -0.29
PHGDH-208ENST00000641023 PDZD2O15018 2839 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 UNC79Q9P2D8 2635 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 A0A1W2PS18 150 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 CA1P00915 261 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-208ENST00000641023 NDUFA6P56556 154 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
PHGDH-208ENST00000641023 P01737 135 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 ELANEP08246 267 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 C16orf54Q6UWD8 224 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 C19orf71A6NCJ1 209 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms