RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MIR17HGQ75NE6 70 aa19.43■□□□□ 0.7
VEGFA-231ENST00000640499 CLUHP3Q96NS8 147 aa19.43■□□□□ 0.7
VEGFA-231ENST00000640499 HRH4Q9H3N8 390 aa19.43■□□□□ 0.7
VEGFA-231ENST00000640499 ZNF331Q9NQX6 463 aaPredicted RBP19.43■□□□□ 0.7
VEGFA-231ENST00000640499 ZNF586Q9NXT0 402 aa19.43■□□□□ 0.7
VEGFA-231ENST00000640499 CSMD3Q7Z407 3707 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 RNF222A6NCQ9 220 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 A8MTW9 85 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 IFNA5P01569 189 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 PRB4P10163 310 aaPredicted RBP19.42■□□□□ 0.7
VEGFA-231ENST00000640499 FAM78BQ5VT40 261 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 ZNF709Q8N972 641 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 SLC25A2Q9BXI2 301 aa19.42■□□□□ 0.7
VEGFA-231ENST00000640499 A0A0J9YWU9 116 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 ZNF705DP0CH99 300 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-231ENST00000640499 ZNF705BP0CI00 300 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-231ENST00000640499 CXCL2P19875 107 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 OR11H2Q8NH07 326 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 SCGB1C1Q8TD33 95 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 TMEM14CQ9P0S9 112 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 TNFSF18Q9UNG2 199 aa19.41■□□□□ 0.7
VEGFA-231ENST00000640499 KMT2CQ8NEZ4 4911 aaKnown RBP19.41■□□□□ 0.7
VEGFA-231ENST00000640499 C17orf112F2Z3M2 114 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 PSG3Q16557 428 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 LCN15Q6UWW0 184 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 AMTNQ6UX39 209 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 RARRES2Q99969 163 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 KCNIP2Q9NS61 270 aa19.4■□□□□ 0.7
VEGFA-231ENST00000640499 SMLR1H3BR10 107 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 PYYP10082 97 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 FXYD7P58549 80 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 TMEM41BQ5BJD5 291 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 FFAR4Q5NUL3 377 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 EBLN2Q6P2I7 272 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 OR4B1Q8NGF8 309 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 SLC35B3Q9H1N7 401 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 XCL2Q9UBD3 114 aa19.39■□□□□ 0.69
VEGFA-231ENST00000640499 FXYD6-FXYD2A0A087WZ82 144 aa19.38■□□□□ 0.69
VEGFA-231ENST00000640499 C3orf84H3BNL1 204 aa19.38■□□□□ 0.69
VEGFA-231ENST00000640499 ZNF738Q8NE65 137 aa19.38■□□□□ 0.69
VEGFA-231ENST00000640499 ZNF705FA8MVS1 300 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-231ENST00000640499 NDUFB4O95168 129 aa19.37■□□□□ 0.69
VEGFA-231ENST00000640499 CNN1P51911 297 aaKnown RBP19.37■□□□□ 0.69
VEGFA-231ENST00000640499 LRRC20Q8TCA0 184 aa19.37■□□□□ 0.69
VEGFA-231ENST00000640499 SLC50A1Q9BRV3 221 aa19.37■□□□□ 0.69
VEGFA-231ENST00000640499 X6R8D5 127 aa19.37■□□□□ 0.69
VEGFA-231ENST00000640499 TRBV19A0A075B6N1 114 aa19.36■□□□□ 0.69
VEGFA-231ENST00000640499 ZNF705EA8MWA4 302 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-231ENST00000640499 CASC10Q5T4H9 136 aa19.36■□□□□ 0.69
VEGFA-231ENST00000640499 ZNF503Q96F45 646 aa19.36■□□□□ 0.69
VEGFA-231ENST00000640499 FUT9Q9Y231 359 aa19.36■□□□□ 0.69
VEGFA-231ENST00000640499 PRAC2D3DTV9 90 aa19.35■□□□□ 0.69
VEGFA-231ENST00000640499 HIST1H1EP10412 219 aaKnown RBP19.35■□□□□ 0.69
VEGFA-231ENST00000640499 PSG9Q00887 426 aa19.35■□□□□ 0.69
VEGFA-231ENST00000640499 GUK1Q16774 197 aa19.35■□□□□ 0.69
VEGFA-231ENST00000640499 OR8A1Q8NGG7 326 aa19.35■□□□□ 0.69
VEGFA-231ENST00000640499 MRPL32Q9BYC8 188 aaKnown RBP19.35■□□□□ 0.69
VEGFA-231ENST00000640499 TIMM9Q9Y5J7 89 aa19.35■□□□□ 0.69
VEGFA-231ENST00000640499 EIF3GO75821 320 aaKnown RBP eCLIP19.34■□□□□ 0.69
VEGFA-231ENST00000640499 NUTF2P61970 127 aaKnown RBP19.34■□□□□ 0.69
VEGFA-231ENST00000640499 ZFAND6Q6FIF0 208 aa19.34■□□□□ 0.69
VEGFA-231ENST00000640499 INO80EQ8NBZ0 244 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-231ENST00000640499 RPUSD4Q96CM3 377 aaKnown RBP19.34■□□□□ 0.69
VEGFA-231ENST00000640499 ZNF253O75346 499 aa19.33■□□□□ 0.68
VEGFA-231ENST00000640499 Q8NAQ8 132 aa19.33■□□□□ 0.68
VEGFA-231ENST00000640499 HSD17B11Q8NBQ5 300 aa19.33■□□□□ 0.68
VEGFA-231ENST00000640499 FXYD5Q96DB9 178 aa19.33■□□□□ 0.68
VEGFA-231ENST00000640499 MFFQ9GZY8 342 aa19.33■□□□□ 0.68
VEGFA-231ENST00000640499 DEFB4AO15263 64 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 RBMY1A1P0DJD3 496 aaKnown RBP19.32■□□□□ 0.68
VEGFA-231ENST00000640499 RBMY1CP0DJD4 496 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 ZNF266Q14584 549 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 RBMY1FQ15415 496 aaKnown RBP19.32■□□□□ 0.68
VEGFA-231ENST00000640499 OR11H4Q8NGC9 324 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 C1QTNF4Q9BXJ3 329 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 OR51M1Q9H341 326 aa19.32■□□□□ 0.68
VEGFA-231ENST00000640499 DYNC2H1Q8NCM8 4307 aaKnown RBP19.32■□□□□ 0.68
VEGFA-231ENST00000640499 DUSP14O95147 198 aaKnown RBP19.31■□□□□ 0.68
VEGFA-231ENST00000640499 ATP6V0CP27449 155 aa19.31■□□□□ 0.68
VEGFA-231ENST00000640499 RPL7L1Q6DKI1 246 aaKnown RBP19.31■□□□□ 0.68
VEGFA-231ENST00000640499 ZNF705AQ6ZN79 300 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-231ENST00000640499 Q6ZNX1 250 aa19.31■□□□□ 0.68
VEGFA-231ENST00000640499 IL17DQ8TAD2 202 aa19.31■□□□□ 0.68
VEGFA-231ENST00000640499 CRXO43186 299 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-231ENST00000640499 RAB2AP61019 212 aa19.3■□□□□ 0.68
VEGFA-231ENST00000640499 HIST1H1AQ02539 215 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-231ENST00000640499 BLNKQ8WV28 456 aa19.3■□□□□ 0.68
VEGFA-231ENST00000640499 SH3BGRL3Q9H299 93 aa19.3■□□□□ 0.68
VEGFA-231ENST00000640499 IGHV4-28A0A0C4DH34 117 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 ARPC5O15511 151 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 OR10J4P0C629 311 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 M6PRP20645 277 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 C1orf158Q8N1D5 194 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 OR2G3Q8NGZ4 309 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 RNF141Q8WVD5 230 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 PAXXQ9BUH6 204 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 C11orf68Q9H3H3 251 aaKnown RBP19.29■□□□□ 0.68
VEGFA-231ENST00000640499 CYTL1Q9NRR1 136 aa19.29■□□□□ 0.68
VEGFA-231ENST00000640499 M0R3E3 92 aa19.28■□□□□ 0.68
VEGFA-231ENST00000640499 NBEAP1P0C6P0 100 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms