RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	CXCL2	P19875	107 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	CDKN1B	P46527	198 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	ID3	Q02535	119 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	PXDC1	Q5TGL8	231 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	LCN15	Q6UWW0	184 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	ZNF575	Q86XF7	245 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	RPUSD4	Q96CM3	377 aa	Known RBP	10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	SLC50A1	Q9BRV3	221 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	ARV1	Q9H2C2	271 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	GSKIP	Q9P0R6	139 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	LINC00854	A0A1B0GVQ3	168 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	C16orf90	A8MZG2	172 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599		L7N2F9	121 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	PRM2	P04554	102 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	PLP1	P60201	277 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	VAMP2	P63027	116 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	SLC38A11	Q08AI6	406 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	FCN2	Q15485	313 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	IAH1	Q2TAA2	248 aa	Predicted RBP	10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	ZNF493	Q6ZR52	646 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	CCDC190	Q86UF4	302 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	BPIFA4P	Q86YQ2	179 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	C6orf223	Q8N319	242 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	SMIM8	Q96KF7	97 aa		10.35	□□□□□ -0.75
TARDBP-231	ENST00000639599	NBDY	A0A0U1RRE5	68 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	FNDC10	F2Z333	226 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599		H7BYZ3	331 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	NDUFB6	O95139	128 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	OR4E1	P0C645	316 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	AZU1	P20160	251 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	RAB31	Q13636	194 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	ZNF846	Q147U1	533 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	LINC00305	Q7Z4B0	112 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	TMEM263	Q8WUH6	116 aa	Known RBP	10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	C17orf77	Q96MU5	243 aa		10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	NOP10	Q9NPE3	64 aa	Known RBP	10.34	□□□□□ -0.75
TARDBP-231	ENST00000639599	PMS2P5	A8MQ11	134 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	SNURFL	B1AK76	121 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	TSC22D2	O75157	780 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	BCAP31	P51572	246 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	OR5I1	Q13606	314 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	C20orf144	Q9BQM9	153 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	KIAA1109	Q2LD37	5005 aa		10.33	□□□□□ -0.76
TARDBP-231	ENST00000639599	PCLO	Q9Y6V0	5065 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	RLN2	P04090	185 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	TAS2R30	P59541	319 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	TTC32	Q5I0X7	151 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	TMEM14EP	Q6UXP3	125 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599		Q6ZRG5	221 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	GGACT	Q9BVM4	153 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	SRR	Q9GZT4	340 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	FLVCR2	Q9UPI3	526 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	PXMP4	Q9Y6I8	212 aa		10.32	□□□□□ -0.76
TARDBP-231	ENST00000639599	FAM25E	A8MYX2	175 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599		K7EPK0	472 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	AGPAT2	O15120	278 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	CCNK	O75909	580 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	SNRPC	P09234	159 aa	Known RBP	10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	PRB4	P10163	310 aa	Predicted RBP	10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	C10orf113	Q5VZT2	155 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	SSX7	Q7RTT5	188 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	ZNRF2	Q8NHG8	242 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	RNF141	Q8WVD5	230 aa		10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.31	□□□□□ -0.76
TARDBP-231	ENST00000639599	PLAC8L1	A1L4L8	177 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599		J3KRW8	73 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	M6PR	P20645	277 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	LEP	P41159	167 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	CAV2	P51636	162 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	TNP2	Q05952	138 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	CNPY1	Q3B7I2	92 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	RCL1	Q9Y2P8	373 aa	Known RBP	10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599	LINC00588	Q9Y4M8	146 aa		10.3	□□□□□ -0.76
TARDBP-231	ENST00000639599		H3BTX0	84 aa		10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	PVALB	P20472	110 aa	Predicted RBP	10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	CAMLG	P49069	296 aa		10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	PATE2	Q6UY27	113 aa		10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	OR1L4	Q8NGR5	311 aa		10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	RNASE8	Q8TDE3	154 aa	Known RBP	10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	LSM5	Q9Y4Y9	91 aa	Known RBP	10.29	□□□□□ -0.76
TARDBP-231	ENST00000639599	TRAV26-1	A0A087WT03	109 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599		A0A0J9YY99	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GAGE12B	A1L429	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	C5orf51	A6NDU8	294 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GAGE7	O76087	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GAGE12F	P0CL80	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GAGE12G	P0CL81	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GAGE12I	P0CL82	117 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	BAK1	Q16611	211 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GUK1	Q16774	197 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	PFDN5	Q99471	154 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599		Q9H8V8	135 aa		10.28	□□□□□ -0.76
TARDBP-231	ENST00000639599	GFI1B	Q5VTD9	330 aa		10.27	□□□□□ -0.77
TARDBP-231	ENST00000639599	RXFP4	Q8TDU9	374 aa		10.27	□□□□□ -0.77
TARDBP-231	ENST00000639599	MITD1	Q8WV92	249 aa		10.27	□□□□□ -0.77
TARDBP-231	ENST00000639599	MGST2	Q99735	147 aa		10.27	□□□□□ -0.77
TARDBP-231	ENST00000639599	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.27	□□□□□ -0.77

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