RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 TMEM213A2RRL7 107 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 SYS1-DBNDD2H3BUS1 97 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 OR2J3O76001 311 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 C20orf202A1L168 122 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 K7EIM0 57 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 GNG7O60262 68 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 NUDT3O95989 172 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 CRYGBP07316 175 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 HLA-DMBP28068 263 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 CBY3A6NI87 242 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 CRIP1P50238 77 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 OR4F17Q8NGA8 305 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 SMKR1H3BMG3 65 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 BPIFA4PQ86YQ2 179 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 OR8A1Q8NGG7 326 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 PSG8Q9UQ74 426 aa11.07□□□□□ -0.64
CACNA1A-228ENST00000636610 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 HLA-DRB1P01911 266 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 RNF24Q9Y225 148 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 A0A087X0K7 114 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 CUBNO60494 3623 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 NCR2O95944 276 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
CACNA1A-228ENST00000636610 B9A039 149 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 CCL21O00585 134 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 TMEM11P17152 192 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 PPIFP30405 207 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 FAM71F2Q6NXP2 309 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 NDUFS7O75251 213 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 IFI27P40305 119 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 NDPQ00604 133 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 VAMP3Q15836 100 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
CACNA1A-228ENST00000636610 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
CACNA1A-228ENST00000636610 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
CACNA1A-228ENST00000636610 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
CACNA1A-228ENST00000636610 NPIPB5A8MRT5 1133 aa11.04□□□□□ -0.64
CACNA1A-228ENST00000636610 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
CACNA1A-228ENST00000636610 IGF2-ASQ6U949 168 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 SHANK2-AS3Q9BTD1 123 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 D6R8Y8 96 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 NBR2O15453 112 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 RBPJQ06330 500 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 C8orf31Q8N9H6 132 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 AP5S1Q9NUS5 200 aa11.03□□□□□ -0.64
CACNA1A-228ENST00000636610 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 DPM3Q9P2X0 92 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 LIPFP07098 398 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 GAGE1Q13065 139 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 NEU4Q8WWR8 484 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 CREBBPQ92793 2442 aa11.02□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF207O43670 478 aaKnown RBP11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 PSG3Q16557 428 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 PLP1P60201 277 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 VGLL1Q99990 258 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 COX11Q9Y6N1 276 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 CENPEQ02224 2701 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
CACNA1A-228ENST00000636610 H3BRN7 92 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 K7EQM0 130 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 ECSCRQ19T08 205 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 HAX1O00165 279 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 GAS8-AS1O95177 125 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms