RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SNRPGP15A8MWD9 76 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 RLN2P04090 185 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 TBPP20226 339 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 GAMTQ14353 236 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 NMSQ5H8A3 153 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 FAAP20Q6NZ36 180 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 NOXA1Q86UR1 476 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 RNF182Q8N6D2 247 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 OR4D10Q8NGI6 311 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
CLN6-212ENST00000636020 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
CLN6-212ENST00000636020 H7BYZ3 331 aa12.22□□□□□ -0.45
CLN6-212ENST00000636020 RAB3DO95716 219 aa12.22□□□□□ -0.45
CLN6-212ENST00000636020 FAUP35544 74 aaKnown RBP12.22□□□□□ -0.45
CLN6-212ENST00000636020 RHOBP62745 196 aa12.22□□□□□ -0.45
CLN6-212ENST00000636020 MZT2BQ6NZ67 158 aa12.22□□□□□ -0.45
CLN6-212ENST00000636020 NRARPQ7Z6K4 114 aa12.22□□□□□ -0.45
CLN6-212ENST00000636020 LRCOL1A6NCL2 159 aa12.21□□□□□ -0.45
CLN6-212ENST00000636020 CENPXA8MT69 81 aa12.21□□□□□ -0.45
CLN6-212ENST00000636020 OR2F1Q13607 317 aa12.21□□□□□ -0.45
CLN6-212ENST00000636020 RNASE10Q5GAN6 216 aaKnown RBP12.21□□□□□ -0.45
CLN6-212ENST00000636020 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
CLN6-212ENST00000636020 FABP1P07148 127 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
CLN6-212ENST00000636020 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
CLN6-212ENST00000636020 MEF2DQ14814 521 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 ZNF738Q8NE65 137 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 SLC25A22Q9H936 323 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 LY96Q9Y6Y9 160 aa12.2□□□□□ -0.46
CLN6-212ENST00000636020 Q6ZSA8 131 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 CCDC28AQ8IWP9 274 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 ARRDC1Q8N5I2 433 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 OR4D5Q8NGN0 318 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 ENKURQ8TC29 256 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 LINC00467Q9BRT7 94 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
CLN6-212ENST00000636020 FAM240BA0A1B0GVZ2 78 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 DISC1C4P0D8 188 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 K7EP13 123 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 CDKN1BP46527 198 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 CCR6P51684 374 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 Q6ZTI0 123 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 OR51S1Q8NGJ8 323 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 OR1B1Q8NGR6 318 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
CLN6-212ENST00000636020 OR5AC1P0C628 307 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
CLN6-212ENST00000636020 KIR3DS1Q14943 382 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 Q6ZNX1 250 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 U3KQ87 197 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 TNXBP22105 4242 aa12.17□□□□□ -0.46
CLN6-212ENST00000636020 NDUFB6O95139 128 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 CDS2O95674 445 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 TCRBP04435 133 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
CLN6-212ENST00000636020 OR13C8Q8NGS7 320 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 LHFPL5Q8TAF8 219 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 GPR82Q96P67 336 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 TRGV9Q99603 122 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 PRRT1Q99946 306 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
CLN6-212ENST00000636020 B3GALNT1O75752 331 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 FGL1Q08830 312 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 Q8N814 137 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 TMEM222Q9H0R3 208 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 SCP2D1Q9UJQ7 156 aa12.15□□□□□ -0.46
CLN6-212ENST00000636020 IGKV1OR2-108A0A075B7D4 117 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 PAX4O43316 350 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
CLN6-212ENST00000636020 EVI2AP22794 236 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 SCGB2B2Q4G0G5 96 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 CCDC71LQ8N9Z2 235 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 GLYATL2Q8WU03 294 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 MARVELD1Q9BSK0 173 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 C20orf85Q9H1P6 137 aa12.14□□□□□ -0.47
CLN6-212ENST00000636020 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 A0A1B0GVG6 124 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
CLN6-212ENST00000636020 PRB4P10163 310 aaPredicted RBP12.13□□□□□ -0.47
CLN6-212ENST00000636020 CXCL3P19876 107 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 PSG3Q16557 428 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 SELENOHQ8IZQ5 122 aaKnown RBP12.13□□□□□ -0.47
CLN6-212ENST00000636020 LGI3Q8N145 548 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
CLN6-212ENST00000636020 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
CLN6-212ENST00000636020 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
CLN6-212ENST00000636020 PSCAO43653 123 aa12.12□□□□□ -0.47
CLN6-212ENST00000636020 GGNBP1Q5YKI7 109 aa12.12□□□□□ -0.47
CLN6-212ENST00000636020 THAP8Q8NA92 274 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms