RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ZNF738Q8NE65 137 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 OR8A1Q8NGG7 326 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 PLAC8L1A1L4L8 177 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 OR5G3P0C626 314 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 METTL15P1P0C7V9 234 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 MED14OSP0DP75 135 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 RRAS2P62070 204 aaPredicted RBP8.79□□□□□ -1
SOX2-OT-247ENST00000628347 C4orf46Q504U0 113 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 TEPPQ6URK8 271 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 PATE2Q6UY27 113 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 BAP18Q8IXM2 172 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 ZBTB8BQ8NAP8 495 aaPredicted RBP8.79□□□□□ -1
SOX2-OT-247ENST00000628347 OR10P1Q8NGE3 313 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 UHRF2Q96PU4 802 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 SDHCQ99643 169 aaPredicted RBP8.79□□□□□ -1
SOX2-OT-247ENST00000628347 GGACTQ9BVM4 153 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 ARL6Q9H0F7 186 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 ARV1Q9H2C2 271 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 MGAT4CQ9UBM8 478 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 RCL1Q9Y2P8 373 aaKnown RBP8.79□□□□□ -1
SOX2-OT-247ENST00000628347 HSPG2P98160 4391 aa8.79□□□□□ -1
SOX2-OT-247ENST00000628347 IGLV2-18A0A075B6J9 118 aa8.78□□□□□ -1
SOX2-OT-247ENST00000628347 CENPXA8MT69 81 aa8.78□□□□□ -1
SOX2-OT-247ENST00000628347 ANXA7P20073 488 aaKnown RBP8.78□□□□□ -1
SOX2-OT-247ENST00000628347 HIST1H1AQ02539 215 aaPredicted RBP8.78□□□□□ -1
SOX2-OT-247ENST00000628347 IAH1Q2TAA2 248 aaPredicted RBP8.78□□□□□ -1
SOX2-OT-247ENST00000628347 LCN15Q6UWW0 184 aa8.78□□□□□ -1
SOX2-OT-247ENST00000628347 ZNF546Q86UE3 836 aa8.78□□□□□ -1
SOX2-OT-247ENST00000628347 MITD1Q8WV92 249 aa8.78□□□□□ -1
SOX2-OT-247ENST00000628347 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 SCGB1D2O95969 90 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 PRM2P04554 102 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 AZU1P20160 251 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 TAS2R60P59551 318 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 RHOBP62745 196 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 SLC38A11Q08AI6 406 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 SOHLH1Q5JUK2 328 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 LRRC20Q8TCA0 184 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 ZNF331Q9NQX6 463 aaPredicted RBP8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 DNAH5Q8TE73 4624 aa8.77□□□□□ -1.01
SOX2-OT-247ENST00000628347 C7orf66A4D0T2 115 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 CBY3A6NI87 242 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 GOSR2O14653 212 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 AGPAT2O15120 278 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 MBPP02686 304 aaPredicted RBP8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 CDKN1BP46527 198 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 ARL16Q0P5N6 197 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 ZNF493Q6ZR52 646 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 LINC00305Q7Z4B0 112 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 RPUSD4Q96CM3 377 aaKnown RBP8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 C16orf74Q96GX8 76 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 LINC01587Q99440 93 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 PPP1R14DQ9NXH3 145 aa8.76□□□□□ -1.01
SOX2-OT-247ENST00000628347 LINC00854A0A1B0GVQ3 168 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 ATP5G1P05496 136 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 DEFB130BP0DP73 79 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 DEFB130AP0DP74 79 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 IL7P13232 177 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 ATP5G3P48201 142 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 C1orf134Q5TEV5 83 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 GSKIPQ9P0R6 139 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 ABCA13Q86UQ4 5058 aa8.75□□□□□ -1.01
SOX2-OT-247ENST00000628347 MUC4Q99102 2169 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 F5H768 121 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 H7BYZ3 331 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 RNASE8Q8TDE3 154 aaKnown RBP8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 TMEM37Q8WXS4 190 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 MGST2Q99735 147 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 ATG101Q9BSB4 218 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 C20orf85Q9H1P6 137 aa8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 TIMM8BQ9Y5J9 83 aaPredicted RBP8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
SOX2-OT-247ENST00000628347 PLA2G10O15496 165 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 OPCMLQ14982 345 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 FCN2Q15485 313 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 ZNRF2Q8NHG8 242 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 C11orf1Q9H5F2 150 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 PXMP4Q9Y6I8 212 aa8.73□□□□□ -1.01
SOX2-OT-247ENST00000628347 L7N2F9 121 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 SLC17A3O00476 420 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 CAMLGP49069 296 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 VAMP2P63027 116 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 RAB31Q13636 194 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 ZNF846Q147U1 533 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 OR10J6PQ8NGY7 276 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 DNAJC4Q9NNZ3 241 aa8.72□□□□□ -1.01
SOX2-OT-247ENST00000628347 NBDYA0A0U1RRE5 68 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 PRAC2D3DTV9 90 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms