RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SVBPQ8N300 66 aa8.97□□□□□ -0.97
LINC00963-220ENST00000625171 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
LINC00963-220ENST00000625171 C17orf77Q96MU5 243 aa8.97□□□□□ -0.97
LINC00963-220ENST00000625171 KLF12Q9Y4X4 402 aa8.97□□□□□ -0.97
LINC00963-220ENST00000625171 LY96Q9Y6Y9 160 aa8.97□□□□□ -0.97
LINC00963-220ENST00000625171 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 A0A087WW49 117 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 HELTA6NFD8 242 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 S100A9P06702 114 aaKnown RBP8.96□□□□□ -0.98
LINC00963-220ENST00000625171 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.98
LINC00963-220ENST00000625171 UBE2G2P60604 165 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
LINC00963-220ENST00000625171 SIGLEC15Q6ZMC9 328 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 C5orf17Q8NAS9 161 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 OR1N2Q8NGR9 330 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 C2CD4CQ8TF44 421 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 SLC50A1Q9BRV3 221 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 SIGLEC8Q9NYZ4 499 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 PRELID1Q9Y255 219 aa8.96□□□□□ -0.98
LINC00963-220ENST00000625171 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 PGPA6NDG6 321 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 FBLL1A6NHQ2 334 aaKnown RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 C9JCJ5 164 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 CHEK1O14757 476 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 SNAPINO95295 136 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 APOHP02749 345 aaPredicted RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 CD28P10747 220 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 TAS2R60P59551 318 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 RANP62826 216 aaKnown RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 SRSF2Q01130 221 aaKnown RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 C12orf54Q6X4T0 127 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 SMIM12Q96EX1 92 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 OR5B12Q96R08 314 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 C20orf24Q9BUV8 137 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 Q9H3A6 140 aa8.95□□□□□ -0.98
LINC00963-220ENST00000625171 ZNF331Q9NQX6 463 aaPredicted RBP8.95□□□□□ -0.98
LINC00963-220ENST00000625171 ZNF320A2RRD8 509 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 TMEM213A2RRL7 107 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 ZNF785A8K8V0 405 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 B4DEV8 164 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 APOC3P02656 99 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 NDUFA11Q86Y39 141 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 DPF1Q92782 380 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 RHPN1-AS1Q9BWJ2 59 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 PARLQ9H300 379 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 AAMDCQ9H7C9 122 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 SDF2L1Q9HCN8 221 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 PEMTQ9UBM1 199 aa8.94□□□□□ -0.98
LINC00963-220ENST00000625171 ADARB2-AS1A8MUL3 147 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 ZNF727A8MUV8 499 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 ATF4P18848 351 aaPredicted RBP8.93□□□□□ -0.98
LINC00963-220ENST00000625171 CBLN1P23435 193 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 TM4SF20Q53R12 229 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 CITED2Q99967 270 aaPredicted RBP8.93□□□□□ -0.98
LINC00963-220ENST00000625171 ATG101Q9BSB4 218 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 MLXQ9UH92 298 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 NAT8Q9UHE5 227 aa8.93□□□□□ -0.98
LINC00963-220ENST00000625171 IGHV3OR16-8A0A075B7F1 116 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 TRAV2A0A0B4J234 112 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 RBAKDNA6NC62 111 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 C2orf70A6NJV1 201 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 CCL24O00175 119 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 PEX7O00628 323 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 TCRAP04437 139 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 SYNJ2BPP57105 145 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 TMEM183BQ1AE95 376 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 C18orf65Q6ZTR6 163 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 CLRN3Q8NCR9 226 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 OR9G4Q8NGQ1 327 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 BLNKQ8WV28 456 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 RAX2Q96IS3 184 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 SMIM7Q9BQ49 75 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 PPP1R14DQ9NXH3 145 aa8.92□□□□□ -0.98
LINC00963-220ENST00000625171 A0A087WWC5 75 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 SOCS3O14543 225 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
LINC00963-220ENST00000625171 RHEBQ15382 184 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 GUCA2BQ16661 112 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 CMTM2Q8TAZ6 248 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 NRN1Q9NPD7 142 aa8.91□□□□□ -0.98
LINC00963-220ENST00000625171 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 K7EQM0 130 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 M0QZ24 198 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 SLC17A3O00476 420 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 ISLRO14498 428 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 ZNF207O43670 478 aaKnown RBP8.9□□□□□ -0.98
LINC00963-220ENST00000625171 FOLR2P14207 255 aa8.9□□□□□ -0.98
LINC00963-220ENST00000625171 RPL35P42766 123 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms