RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 CNN1P51911 297 aaKnown RBP10.65□□□□□ -0.7
LINC00643-206ENST00000623985 IGFL4Q6B9Z1 124 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 FRAS1Q86XX4 4008 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 TEX48A0A1B0GUV7 120 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 CXCL3P19876 107 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 PRR20EP86478 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 PRR20CP86479 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 PRR20DP86480 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 PRR20BP86481 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 PRR20AP86496 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 Q6ZRG5 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 OR11H7Q8NGC8 314 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 NMES1Q9C002 83 aa10.64□□□□□ -0.71
LINC00643-206ENST00000623985 IGLL5B9A064 214 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
LINC00643-206ENST00000623985 DEFA1P59665 94 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 DEFA3P59666 94 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 BAXQ07812 192 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 OPCMLQ14982 345 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 ATP6V1FQ16864 119 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 MIC13Q5XKP0 118 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 C1orf158Q8N1D5 194 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 OR1L4Q8NGR5 311 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 IGF2BP2-AS1Q96M15 143 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 PFDN5Q99471 154 aa10.63□□□□□ -0.71
LINC00643-206ENST00000623985 ZNF331Q9NQX6 463 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-206ENST00000623985 DNAH6Q9C0G6 4158 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 INMT-MINDY4F8WBC2 141 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 MPDU1O75352 247 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 INSP01308 110 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 HBE1P02100 147 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 SPART-AS1P0CW21 52 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 PSG3Q16557 428 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 OR8A1Q8NGG7 326 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 APLNQ9ULZ1 77 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
LINC00643-206ENST00000623985 IGHV4-4A0A075B6R2 117 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 E5RGE8 158 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 M0R2Z0 102 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 SIX6O95475 246 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 RLN2P04090 185 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 IGLC2P0DOY2 106 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 FGF7P21781 194 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 B2MP61769 119 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
LINC00643-206ENST00000623985 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 TMEM208Q9BTX3 173 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 RNF126Q9BV68 326 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
LINC00643-206ENST00000623985 LOC102723971A0A1B0GUV8 181 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-206ENST00000623985 EMP1P54849 157 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 CYCSP99999 105 aaKnown RBP10.6□□□□□ -0.71
LINC00643-206ENST00000623985 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 RPUSD4Q96CM3 377 aaKnown RBP10.6□□□□□ -0.71
LINC00643-206ENST00000623985 SLC25A31Q9H0C2 315 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 PXMP4Q9Y6I8 212 aa10.6□□□□□ -0.71
LINC00643-206ENST00000623985 SLC17A3O00476 420 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 RHOBP62745 196 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 GUK1Q16774 197 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 BAP18Q8IXM2 172 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 OR5C1Q8NGR4 320 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 OR5AC2Q9NZP5 309 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 BIRC6Q9NR09 4857 aa10.59□□□□□ -0.71
LINC00643-206ENST00000623985 ZNF253O75346 499 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 PET100P0DJ07 73 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 H2BFSP57053 126 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 NHLH2Q02577 135 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
LINC00643-206ENST00000623985 SAT2Q96F10 170 aaPredicted RBP10.58□□□□□ -0.72
LINC00643-206ENST00000623985 PPP1R14DQ9NXH3 145 aa10.58□□□□□ -0.72
LINC00643-206ENST00000623985 YTHDF2Q9Y5A9 579 aaKnown RBP10.58□□□□□ -0.72
LINC00643-206ENST00000623985 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
LINC00643-206ENST00000623985 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
LINC00643-206ENST00000623985 H3BQ15 152 aa10.57□□□□□ -0.72
LINC00643-206ENST00000623985 SSNA1O43805 119 aa10.57□□□□□ -0.72
LINC00643-206ENST00000623985 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
LINC00643-206ENST00000623985 CDKN1BP46527 198 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms