RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 TEX261Q6UWH6 196 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 Q6ZRG5 221 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 LINC00305Q7Z4B0 112 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 TMEM37Q8WXS4 190 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 C20orf173Q96LM9 149 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 C1QTNF4Q9BXJ3 329 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 MPDU1O75352 247 aa18.11■□□□□ 0.49
PMS1-220ENST00000618056 RPL29P47914 159 aaKnown RBP18.11■□□□□ 0.49
PMS1-220ENST00000618056 NHLH2Q02577 135 aa18.11■□□□□ 0.49
PMS1-220ENST00000618056 BAXQ07812 192 aa18.11■□□□□ 0.49
PMS1-220ENST00000618056 INO80EQ8NBZ0 244 aaPredicted RBP18.11■□□□□ 0.49
PMS1-220ENST00000618056 MRPS12O15235 138 aaKnown RBP18.1■□□□□ 0.49
PMS1-220ENST00000618056 IFNA7P01567 189 aa18.1■□□□□ 0.49
PMS1-220ENST00000618056 MIC13Q5XKP0 118 aa18.1■□□□□ 0.49
PMS1-220ENST00000618056 DNAJC4Q9NNZ3 241 aa18.1■□□□□ 0.49
PMS1-220ENST00000618056 TRAV8-2A0A0B4J237 113 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 ZNF705EA8MWA4 302 aaPredicted RBP18.09■□□□□ 0.49
PMS1-220ENST00000618056 C10orf113Q5VZT2 155 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 EBLN2Q6P2I7 272 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 KCNRGQ8N5I3 272 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 OR5C1Q8NGR4 320 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 SACSQ9NZJ4 4579 aa18.09■□□□□ 0.49
PMS1-220ENST00000618056 A0A0J9YX75 114 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 FGF7P21781 194 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 ZNF680Q8NEM1 530 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 OR1L4Q8NGR5 311 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 RNF126Q9BV68 326 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 SLC39A9Q9NUM3 307 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 CLEC5AQ9NY25 188 aa18.08■□□□□ 0.49
PMS1-220ENST00000618056 KANTRA0A1W2PQU2 76 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 RNF222A6NCQ9 220 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 B2MP61769 119 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 Q8NAQ8 132 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 PFDN5Q99471 154 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 F6UB75 175 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 BCL2L11O43521 198 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 MIFP14174 115 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 BPIFA4PQ86YQ2 179 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 XCL2Q9UBD3 114 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 X6R8D5 127 aa18.07■□□□□ 0.48
PMS1-220ENST00000618056 PLECQ15149 4684 aaKnown RBP18.06■□□□□ 0.48
PMS1-220ENST00000618056 A8MTW9 85 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 FAM78BQ5VT40 261 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 MORN5Q5VZ52 161 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 SLC51BQ86UW2 128 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 ZNF709Q8N972 641 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 OR4B1Q8NGF8 309 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 NPCDR1Q9BY65 106 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 PXMP4Q9Y6I8 212 aa18.06■□□□□ 0.48
PMS1-220ENST00000618056 IGKV3-20P01619 116 aa18.05■□□□□ 0.48
PMS1-220ENST00000618056 IGFL4Q6B9Z1 124 aa18.05■□□□□ 0.48
PMS1-220ENST00000618056 RNF182Q8N6D2 247 aa18.05■□□□□ 0.48
PMS1-220ENST00000618056 PSG9Q00887 426 aa18.04■□□□□ 0.48
PMS1-220ENST00000618056 LCN15Q6UWW0 184 aa18.04■□□□□ 0.48
PMS1-220ENST00000618056 RYR2Q92736 4967 aa18.04■□□□□ 0.48
PMS1-220ENST00000618056 CXorf65A6NEN9 183 aa18.03■□□□□ 0.48
PMS1-220ENST00000618056 CLINT1Q14677 625 aa18.03■□□□□ 0.48
PMS1-220ENST00000618056 IGHV4-28A0A0C4DH34 117 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 LCE6AA0A183 80 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 PMS2P11Q13670 270 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 LRRC20Q8TCA0 184 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 AQP10Q96PS8 301 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 ARPC5LQ9BPX5 153 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 SLC50A1Q9BRV3 221 aa18.02■□□□□ 0.48
PMS1-220ENST00000618056 NUPR2A6NF83 97 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 DEFB4AO15263 64 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 DUSP14O95147 198 aaKnown RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 IGLC2P0DOY2 106 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 ZNF705AQ6ZN79 300 aaPredicted RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 SLC7A5P1Q8MH63 180 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 ZNF738Q8NE65 137 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 SLC35B3Q9H1N7 401 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 HRH4Q9H3N8 390 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 ZNF331Q9NQX6 463 aaPredicted RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 RBMY1A1P0DJD3 496 aaKnown RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 RBMY1CP0DJD4 496 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 RBMY1FQ15415 496 aaKnown RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 PSG3Q16557 428 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 AMTNQ6UX39 209 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 C11orf45Q8TAV5 145 aa18.01■□□□□ 0.47
PMS1-220ENST00000618056 WDR61Q9GZS3 305 aaKnown RBP18.01■□□□□ 0.47
PMS1-220ENST00000618056 RPL12P30050 165 aaKnown RBP18■□□□□ 0.47
PMS1-220ENST00000618056 CNN1P51911 297 aaKnown RBP18■□□□□ 0.47
PMS1-220ENST00000618056 FXYD7P58549 80 aa18■□□□□ 0.47
PMS1-220ENST00000618056 ATP5SQ99766 215 aa18■□□□□ 0.47
PMS1-220ENST00000618056 ZNF471Q9BX82 626 aaPredicted RBP18■□□□□ 0.47
PMS1-220ENST00000618056 KCNIP2Q9NS61 270 aa18■□□□□ 0.47
PMS1-220ENST00000618056 TRAV5A0A0B4J249 113 aa17.99■□□□□ 0.47
PMS1-220ENST00000618056 ZNF705FA8MVS1 300 aaPredicted RBP17.99■□□□□ 0.47
PMS1-220ENST00000618056 ZNF705DP0CH99 300 aaPredicted RBP17.99■□□□□ 0.47
PMS1-220ENST00000618056 ZNF705BP0CI00 300 aaPredicted RBP17.99■□□□□ 0.47
PMS1-220ENST00000618056 HLA-DMBP28068 263 aa17.99■□□□□ 0.47
PMS1-220ENST00000618056 RAB14P61106 215 aa17.99■□□□□ 0.47
PMS1-220ENST00000618056 CEMP1Q6PRD7 247 aaPredicted RBP17.99■□□□□ 0.47
PMS1-220ENST00000618056 NEU1Q99519 415 aa17.99■□□□□ 0.47
PMS1-220ENST00000618056 GUK1Q16774 197 aa17.98■□□□□ 0.47
PMS1-220ENST00000618056 H3BQ15 152 aa17.97■□□□□ 0.47
PMS1-220ENST00000618056 OR8A1Q8NGG7 326 aa17.97■□□□□ 0.47
PMS1-220ENST00000618056 SAT2Q96F10 170 aaPredicted RBP17.97■□□□□ 0.47
PMS1-220ENST00000618056 TMEM14CQ9P0S9 112 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms