RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 EBLN2Q6P2I7 272 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 Q6ZRG5 221 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
LHX1-202ENST00000616237 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
LHX1-202ENST00000616237 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
LHX1-202ENST00000616237 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
LHX1-202ENST00000616237 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
LHX1-202ENST00000616237 B2MP61769 119 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 AMTNQ6UX39 209 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 MIFP14174 115 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 PSG9Q00887 426 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 CLINT1Q14677 625 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 ZNF705AQ6ZN79 300 aaPredicted RBP12.3□□□□□ -0.44
LHX1-202ENST00000616237 NPCDR1Q9BY65 106 aa12.3□□□□□ -0.44
LHX1-202ENST00000616237 H3BQ15 152 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 H3BTX0 84 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 MPDU1O75352 247 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 IGLC2P0DOY2 106 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 CNN1P51911 297 aaKnown RBP12.29□□□□□ -0.44
LHX1-202ENST00000616237 GCSAMLQ5JQS6 135 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 OR1L4Q8NGR5 311 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 C11orf45Q8TAV5 145 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 RNF24Q9Y225 148 aa12.29□□□□□ -0.44
LHX1-202ENST00000616237 ZNF705FA8MVS1 300 aaPredicted RBP12.28□□□□□ -0.44
LHX1-202ENST00000616237 SLC17A3O00476 420 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 PSG3Q16557 428 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
LHX1-202ENST00000616237 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 OR11H7Q8NGC8 314 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 PFDN5Q99471 154 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 WDR61Q9GZS3 305 aaKnown RBP12.28□□□□□ -0.44
LHX1-202ENST00000616237 ZNF331Q9NQX6 463 aaPredicted RBP12.28□□□□□ -0.44
LHX1-202ENST00000616237 MBD2Q9UBB5 411 aa12.28□□□□□ -0.44
LHX1-202ENST00000616237 HYDINQ4G0P3 5121 aa12.27□□□□□ -0.44
LHX1-202ENST00000616237 CXCL2P19875 107 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 FCN2Q15485 313 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 LCN15Q6UWW0 184 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 C1orf158Q8N1D5 194 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 PHLDA1Q8WV24 401 aaPredicted RBP12.27□□□□□ -0.45
LHX1-202ENST00000616237 SAT2Q96F10 170 aaPredicted RBP12.27□□□□□ -0.45
LHX1-202ENST00000616237 MFFQ9GZY8 342 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 HRH4Q9H3N8 390 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
LHX1-202ENST00000616237 NUPR2A6NF83 97 aa12.26□□□□□ -0.45
LHX1-202ENST00000616237 OR8A1Q8NGG7 326 aa12.26□□□□□ -0.45
LHX1-202ENST00000616237 LRRC20Q8TCA0 184 aa12.26□□□□□ -0.45
LHX1-202ENST00000616237 ZNF586Q9NXT0 402 aa12.26□□□□□ -0.45
LHX1-202ENST00000616237 CRXO43186 299 aaPredicted RBP12.25□□□□□ -0.45
LHX1-202ENST00000616237 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
LHX1-202ENST00000616237 PET100P0DJ07 73 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
LHX1-202ENST00000616237 NEU1Q99519 415 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 ATP5SQ99766 215 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 SMIM3Q9BZL3 60 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 CELA1Q9UNI1 258 aa12.25□□□□□ -0.45
LHX1-202ENST00000616237 IGHV3OR16-12A0A075B7B8 117 aa12.24□□□□□ -0.45
LHX1-202ENST00000616237 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
LHX1-202ENST00000616237 HIST1H1AQ02539 215 aaPredicted RBP12.24□□□□□ -0.45
LHX1-202ENST00000616237 SPINK13Q1W4C9 94 aa12.24□□□□□ -0.45
LHX1-202ENST00000616237 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
LHX1-202ENST00000616237 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
LHX1-202ENST00000616237 M0R2Z0 102 aa12.23□□□□□ -0.45
LHX1-202ENST00000616237 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
LHX1-202ENST00000616237 FAM167A-AS1Q96KT0 104 aa12.23□□□□□ -0.45
LHX1-202ENST00000616237 IGF2BP2-AS1Q96M15 143 aa12.23□□□□□ -0.45
LHX1-202ENST00000616237 MED28Q9H204 178 aa12.23□□□□□ -0.45
LHX1-202ENST00000616237 PYYP10082 97 aa12.22□□□□□ -0.45
LHX1-202ENST00000616237 Q5BKY6 102 aa12.22□□□□□ -0.45
LHX1-202ENST00000616237 SLC25A2Q9BXI2 301 aa12.22□□□□□ -0.45
LHX1-202ENST00000616237 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
LHX1-202ENST00000616237 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
LHX1-202ENST00000616237 VPS13DQ5THJ4 4388 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 JTBO76095 146 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 NDUFB4O95168 129 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 PRM2P04554 102 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 GUK1Q16774 197 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.45
LHX1-202ENST00000616237 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
LHX1-202ENST00000616237 TRBV19A0A075B6N1 114 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 TRAV12-2A0A075B6T6 113 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 HIST1H1EP10412 219 aaKnown RBP12.2□□□□□ -0.46
LHX1-202ENST00000616237 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 Q6ZTC4 211 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 ZNF767PQ75MW2 155 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
LHX1-202ENST00000616237 ZNF253O75346 499 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 RHOBP62745 196 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 OXA1LQ15070 435 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 RGS21Q2M5E4 152 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 LINC00476Q8WZB0 136 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 KCNIP2Q9NS61 270 aa12.19□□□□□ -0.46
LHX1-202ENST00000616237 C17orf112F2Z3M2 114 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms