RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
CDH5-208ENST00000614547 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 PPIAL4EA0A075B759 164 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 A0A1W2PPI3 338 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 F2RL2O00254 374 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 PPIAL4FP0DN26 164 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
CDH5-208ENST00000614547 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 RPRMLQ8N4K4 120 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 VWC2LB2RUY7 222 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 MSMPQ1L6U9 139 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 SCNM1Q9BWG6 230 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
CDH5-208ENST00000614547 TET2Q6N021 2002 aaPredicted RBP9.48□□□□□ -0.89
CDH5-208ENST00000614547 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 LYNX1G3V0Z9 82 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 LYNX1P0DP58 116 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 LYZL1Q6UWQ5 148 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 OR4A5Q8NH83 315 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 KALRNO60229 2985 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 PAX2Q02962 417 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 GLRXP35754 106 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 PSG3Q16557 428 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 RASL11AQ6T310 242 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 ZNF788Q6ZQV5 615 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.47□□□□□ -0.89
CDH5-208ENST00000614547 OR5AN1Q8NGI8 311 aa9.47□□□□□ -0.89
CDH5-208ENST00000614547 IGKV2-40A0A087WW87 121 aaPredicted RBP9.46□□□□□ -0.89
CDH5-208ENST00000614547 C10orf142B7Z368 130 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 IGKV2D-40P01614 121 aaPredicted RBP9.46□□□□□ -0.89
CDH5-208ENST00000614547 IGKV3-15P01624 115 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 IGHV1-46P01743 117 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.89
CDH5-208ENST00000614547 SEC11AP67812 179 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 CLEC2AQ6UVW9 174 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 MS4A6AQ9H2W1 248 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 PPIAL4CA0A0B4J2A2 164 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 H3BVH4 76 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 PPIAL4GP0DN37 164 aa9.46□□□□□ -0.89
CDH5-208ENST00000614547 LOXL1Q08397 574 aaPredicted RBP9.46□□□□□ -0.89
CDH5-208ENST00000614547 COX8AP10176 69 aa9.46□□□□□ -0.9
CDH5-208ENST00000614547 CD40P25942 277 aa9.46□□□□□ -0.9
CDH5-208ENST00000614547 Q71RC1 249 aaPredicted RBP9.46□□□□□ -0.9
CDH5-208ENST00000614547 NDFIP1Q9BT67 221 aa9.46□□□□□ -0.9
CDH5-208ENST00000614547 C1RLQ9NZP8 487 aa9.46□□□□□ -0.9
CDH5-208ENST00000614547 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.9
CDH5-208ENST00000614547 LEPP41159 167 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 RHOGP84095 191 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 AMTNQ6UX39 209 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 SCGB1D4Q6XE38 83 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 TMEM133Q9H2Q1 129 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 SMG1Q96Q15 3661 aaKnown RBP9.45□□□□□ -0.9
CDH5-208ENST00000614547 NDUFA3O95167 84 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 WT1P19544 449 aaPredicted RBP9.45□□□□□ -0.9
CDH5-208ENST00000614547 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 Q86TA4 180 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 MDS2Q8NDY4 140 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 RITA1Q96K30 269 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 NDUFA4L2Q9NRX3 87 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 DKK2Q9UBU2 259 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 DDB2Q92466 427 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 MBD6Q96DN6 1003 aa9.45□□□□□ -0.9
CDH5-208ENST00000614547 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 HBDP02042 147 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
CDH5-208ENST00000614547 FAM120AOSQ5T036 256 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 SLC25A48Q6ZT89 311 aaKnown RBP9.44□□□□□ -0.9
CDH5-208ENST00000614547 SLC25A39Q9BZJ4 359 aaPredicted RBP9.44□□□□□ -0.9
CDH5-208ENST00000614547 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 HSD52Q0P140 79 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 ZNF418Q8TF45 676 aaPredicted RBP9.44□□□□□ -0.9
CDH5-208ENST00000614547 ZNF747Q9BV97 191 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 CLEC3BP05452 202 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDH5-208ENST00000614547 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 MAP1LC3AQ9H492 121 aa9.44□□□□□ -0.9
CDH5-208ENST00000614547 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 H7C2G1 150 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 FOXE3Q13461 319 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 ETDBQ3ZM63 59 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 ZNF502Q8TBZ5 544 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
CDH5-208ENST00000614547 C22orf46C9J442 243 aa9.43□□□□□ -0.9
CDH5-208ENST00000614547 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
CDH5-208ENST00000614547 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms