RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
SLIRP-212ENST00000613856 DUX3Q96PT4 197 aa8.67□□□□□ -1.02
SLIRP-212ENST00000613856 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
SLIRP-212ENST00000613856 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
SLIRP-212ENST00000613856 DNAH9Q9NYC9 4486 aa8.67□□□□□ -1.02
SLIRP-212ENST00000613856 A0A1W2PRE2 83 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 CHEK1O14757 476 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 ZNF253O75346 499 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 CD5P06127 495 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 GALR1P47211 349 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 ICAM4Q14773 271 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 HAGHQ16775 308 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 OR9G4Q8NGQ1 327 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
SLIRP-212ENST00000613856 RHPN1-AS1Q9BWJ2 59 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 VAX2Q9UIW0 290 aa8.66□□□□□ -1.02
SLIRP-212ENST00000613856 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
SLIRP-212ENST00000613856 TRBV19A0A075B6N1 114 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 IGHV3-49A0A0A0MS15 119 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 HELTA6NFD8 242 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 FAM74A7A6NL05 159 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 H3BQ15 152 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 PAGE4O60829 102 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 ATF4P18848 351 aaPredicted RBP8.65□□□□□ -1.02
SLIRP-212ENST00000613856 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
SLIRP-212ENST00000613856 PEA15Q15121 130 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 NKX6-2Q9C056 277 aaPredicted RBP8.65□□□□□ -1.02
SLIRP-212ENST00000613856 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
SLIRP-212ENST00000613856 SMAD5-AS1Q9Y6J3 95 aa8.65□□□□□ -1.02
SLIRP-212ENST00000613856 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 OVOL1O14753 267 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 FOLR2P14207 255 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 EDN2P20800 178 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 CBLN1P23435 193 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 UBE2G2P60604 165 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 LYPD1Q8N2G4 141 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 RARRES2Q99969 163 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 EIF5A2Q9GZV4 153 aaKnown RBP8.64□□□□□ -1.03
SLIRP-212ENST00000613856 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
SLIRP-212ENST00000613856 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 C11orf94C9JXX5 98 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 K7EIL1 84 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 NDUFB4O95168 129 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 CSN3P07498 182 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 ATP5G3P48201 142 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 CD81P60033 236 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 SRSF3P84103 164 aaKnown RBP8.63□□□□□ -1.03
SLIRP-212ENST00000613856 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 ADAMTSL5Q6ZMM2 481 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 RXFP4Q8TDU9 374 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 BLNKQ8WV28 456 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 OTORQ9NRC9 128 aa8.63□□□□□ -1.03
SLIRP-212ENST00000613856 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 ZNF785A8K8V0 405 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 F6UZH7 168 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 SLC17A3O00476 420 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 PDE6DO43924 150 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 PF4P02776 101 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 PSG9Q00887 426 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 TCF24Q7RTU0 167 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 C11orf52Q96A22 123 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 Q9H3A6 140 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
SLIRP-212ENST00000613856 MLXQ9UH92 298 aa8.62□□□□□ -1.03
SLIRP-212ENST00000613856 RYR2Q92736 4967 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 C9JQL5 133 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 H3BTX0 84 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 SOCS3O14543 225 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
SLIRP-212ENST00000613856 RANP62826 216 aaKnown RBP8.61□□□□□ -1.03
SLIRP-212ENST00000613856 ARL6IP6Q8N6S5 226 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 C5orf17Q8NAS9 161 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 CLEC5AQ9NY25 188 aa8.61□□□□□ -1.03
SLIRP-212ENST00000613856 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
SLIRP-212ENST00000613856 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
SLIRP-212ENST00000613856 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
SLIRP-212ENST00000613856 DYNLRB2Q8TF09 96 aa8.6□□□□□ -1.03
SLIRP-212ENST00000613856 MRPL53Q96EL3 112 aaKnown RBP8.6□□□□□ -1.03
SLIRP-212ENST00000613856 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms