RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 MIR17HGQ75NE6 70 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 OR2G3Q8NGZ4 309 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 FAM167A-AS1Q96KT0 104 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 SLC25A2Q9BXI2 301 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 KNCNA6PVL3 124 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 ISLRO14498 428 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 BCL2L11O43521 198 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 EIF3GO75821 320 aaKnown RBP eCLIP6.34□□□□□ -1.39
SNCA-212ENST00000611107 SNRPCP09234 159 aaKnown RBP6.34□□□□□ -1.39
SNCA-212ENST00000611107 PYYP10082 97 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 MEOX2P50222 304 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 S100A7AQ86SG5 101 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 MRPL32Q9BYC8 188 aaKnown RBP6.34□□□□□ -1.39
SNCA-212ENST00000611107 FUT9Q9Y231 359 aa6.34□□□□□ -1.39
SNCA-212ENST00000611107 BORCS7-ASMTA0A0B4J1R7 106 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 A0A0D9SG52 128 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 A0A0J9YWU9 116 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 H3BQ15 152 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 H3BTX0 84 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 TAAR5O14804 337 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 M6PRP20645 277 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
SNCA-212ENST00000611107 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 SAMD13Q5VXD3 122 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 LCN15Q6UWW0 184 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 ZNF503Q96F45 646 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 HRH4Q9H3N8 390 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 RNF24Q9Y225 148 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 KMT2AQ03164 3969 aa6.33□□□□□ -1.4
SNCA-212ENST00000611107 JTBO76095 146 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 SPP1P10451 314 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 C4BPBP20851 252 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 RHOBP62745 196 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 ACOT6Q3I5F7 207 aaPredicted RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 LGALSLQ3ZCW2 172 aaPredicted RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 FAM122CQ6P4D5 195 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 TMUB2Q71RG4 321 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 SSX7Q7RTT5 188 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 TRPT1Q86TN4 253 aaKnown RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 RNF183Q96D59 192 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 FXYD5Q96DB9 178 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 ZNF331Q9NQX6 463 aaPredicted RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 ZNF586Q9NXT0 402 aa6.32□□□□□ -1.4
SNCA-212ENST00000611107 EPPK1P58107 5090 aaKnown RBP6.32□□□□□ -1.4
SNCA-212ENST00000611107 TRBV19A0A075B6N1 114 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 KANTRA0A1W2PQU2 76 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 F6UB75 175 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 DEFB4AO15263 64 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 SPRY2O43597 315 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 OR7C2O60412 319 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 NDUFB4O95168 129 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 OR10J4P0C629 311 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 ID1P41134 155 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 CDC34P49427 236 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 UBE2L3P68036 154 aaKnown RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 SERF2P84101 59 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 KHDC3LQ587J8 217 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 TMEM41BQ5BJD5 291 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 ACTL10Q5JWF8 245 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 C9orf62Q8N4C0 152 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 RPP25LQ8N5L8 163 aaKnown RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 OR10G4Q8NGN3 311 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 OR10G9Q8NGN4 311 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 OR10G7Q8NGN6 311 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 STOML3Q8TAV4 291 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 GNPNAT1Q96EK6 184 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 SAT2Q96F10 170 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 PHYHIPLQ96FC7 376 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 HYLS1Q96M11 299 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 LINC00052Q96N35 136 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 SLC50A1Q9BRV3 221 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 ZNF471Q9BX82 626 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 SAV1Q9H4B6 383 aaPredicted RBP6.31□□□□□ -1.4
SNCA-212ENST00000611107 RPRMQ9NS64 109 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
SNCA-212ENST00000611107 KIR2DL5BA0A0G2JN68 375 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 KIR2DL5BA0A0G2JPC4 375 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 A0A0J9YX75 114 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 LCE6AA0A183 80 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 A8MTW9 85 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 H3BMM0 161 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
SNCA-212ENST00000611107 PFDN1O60925 122 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 ZNF253O75346 499 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 STAG3L3P0CL85 134 aa6.3□□□□□ -1.4
SNCA-212ENST00000611107 ARL14EPLP0DKL9 152 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms