RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 TMEM37Q8WXS4 190 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 SLC50A1Q9BRV3 221 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 KCNIP2Q9NS61 270 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 GOLT1BQ9Y3E0 138 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
SENP3-209ENST00000610454 TRAV8-2A0A0B4J237 113 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 AMBPP02760 352 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 C17orf77Q96MU5 243 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 TMEM208Q9BTX3 173 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 NPCDR1Q9BY65 106 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 X6R8D5 127 aa9.71□□□□□ -0.86
SENP3-209ENST00000610454 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 C17orf112F2Z3M2 114 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 MPC2O95563 127 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 RBMY1A1P0DJD3 496 aaKnown RBP9.7□□□□□ -0.86
SENP3-209ENST00000610454 RBMY1CP0DJD4 496 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 CXCL3P19876 107 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 CNN1P51911 297 aaKnown RBP9.7□□□□□ -0.86
SENP3-209ENST00000610454 RHOBP62745 196 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 HIST1H1AQ02539 215 aaPredicted RBP9.7□□□□□ -0.86
SENP3-209ENST00000610454 RBMY1FQ15415 496 aaKnown RBP9.7□□□□□ -0.86
SENP3-209ENST00000610454 PSG3Q16557 428 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 CHAC2Q8WUX2 184 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 HRH4Q9H3N8 390 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 ALG5Q9Y673 324 aa9.7□□□□□ -0.86
SENP3-209ENST00000610454 TMEM189A5PLL7 270 aa9.69□□□□□ -0.86
SENP3-209ENST00000610454 H0YIZ8 118 aa9.69□□□□□ -0.86
SENP3-209ENST00000610454 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
SENP3-209ENST00000610454 GUK1Q16774 197 aa9.69□□□□□ -0.86
SENP3-209ENST00000610454 MORN5Q5VZ52 161 aa9.69□□□□□ -0.86
SENP3-209ENST00000610454 ZNF705AQ6ZN79 300 aaPredicted RBP9.69□□□□□ -0.86
SENP3-209ENST00000610454 ZNF331Q9NQX6 463 aaPredicted RBP9.69□□□□□ -0.86
SENP3-209ENST00000610454 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
SENP3-209ENST00000610454 ZNF705FA8MVS1 300 aaPredicted RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 C11orf94C9JXX5 98 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 MRPS12O15235 138 aaKnown RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 INSP01308 110 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 IFNA5P01569 189 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 HBE1P02100 147 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 ZNF705DP0CH99 300 aaPredicted RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 ZNF705BP0CI00 300 aaPredicted RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 HLA-DMBP28068 263 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 RPL12P30050 165 aaKnown RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 OR11H7Q8NGC8 314 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 OR8A1Q8NGG7 326 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
SENP3-209ENST00000610454 NEU1Q99519 415 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 ATP5SQ99766 215 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 MED28Q9H204 178 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 MBD2Q9UBB5 411 aa9.68□□□□□ -0.86
SENP3-209ENST00000610454 RYR3Q15413 4870 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 A8MTW9 85 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 H3BTX0 84 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 M0R2Z0 102 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 IGLC2P0DOY2 106 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 EMP1P54849 157 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 OR10J6PQ8NGY7 276 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 SCGB1C1Q8TD33 95 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 IGF2BP2-AS1Q96M15 143 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 WDR61Q9GZS3 305 aaKnown RBP9.67□□□□□ -0.86
SENP3-209ENST00000610454 HSPB11Q9Y547 144 aa9.67□□□□□ -0.86
SENP3-209ENST00000610454 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 SLC17A3O00476 420 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 LY6G6CO95867 125 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 RRN3P1Q2M238 152 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
SENP3-209ENST00000610454 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 H3BQ15 152 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 ZNF253O75346 499 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
SENP3-209ENST00000610454 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
SENP3-209ENST00000610454 LYSTQ99698 3801 aa9.65□□□□□ -0.87
SENP3-209ENST00000610454 IGLL5B9A064 214 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 HIST1H1EP10412 219 aaKnown RBP9.64□□□□□ -0.87
SENP3-209ENST00000610454 TSPOP30536 169 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 RGS21Q2M5E4 152 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 GCSAMLQ5JQS6 135 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 Q6ZTC4 211 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 BAP18Q8IXM2 172 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 BLNKQ8WV28 456 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 ZNF586Q9NXT0 402 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 CELA1Q9UNI1 258 aa9.64□□□□□ -0.87
SENP3-209ENST00000610454 DYNC2H1Q8NCM8 4307 aaKnown RBP9.64□□□□□ -0.87
SENP3-209ENST00000610454 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms