RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
CCDC12-213ENST00000605875 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
CCDC12-213ENST00000605875 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
CCDC12-213ENST00000605875 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
CCDC12-213ENST00000605875 NEU1Q99519 415 aa13.01□□□□□ -0.33
CCDC12-213ENST00000605875 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
CCDC12-213ENST00000605875 A8MTW9 85 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 PRB4P10163 310 aaPredicted RBP13□□□□□ -0.33
CCDC12-213ENST00000605875 CAMLGP49069 296 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 EMP1P54849 157 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 IFITM3Q01628 133 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 IL15RAQ13261 267 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 AMTNQ6UX39 209 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 UQCC1Q9NVA1 299 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 GOLT1BQ9Y3E0 138 aa13□□□□□ -0.33
CCDC12-213ENST00000605875 PRSS29PA6NIE9 313 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
CCDC12-213ENST00000605875 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
CCDC12-213ENST00000605875 SULT1A1P50225 295 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 MORN5Q5VZ52 161 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 STX12Q86Y82 276 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 C1orf158Q8N1D5 194 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 OR11H7Q8NGC8 314 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 WDR83OSQ9Y284 106 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
CCDC12-213ENST00000605875 DYNC1H1Q14204 4646 aaKnown RBP12.98□□□□□ -0.33
CCDC12-213ENST00000605875 M0R2N4 97 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 M0R2Z0 102 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 SIX6O95475 246 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 CXCL3P19876 107 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 BAXQ07812 192 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 SPINK13Q1W4C9 94 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 C10orf113Q5VZT2 155 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 MIC13Q5XKP0 118 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 LRRC20Q8TCA0 184 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
CCDC12-213ENST00000605875 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
CCDC12-213ENST00000605875 RYR1P21817 5038 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 RTL8CO15255 209 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 DUSP14O95147 198 aaKnown RBP12.97□□□□□ -0.33
CCDC12-213ENST00000605875 INSP01308 110 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 MED14OSP0DP75 135 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 HIST1H1AQ02539 215 aaPredicted RBP12.97□□□□□ -0.33
CCDC12-213ENST00000605875 RAB31Q13636 194 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 OPCMLQ14982 345 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 VWC2Q2TAL6 325 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 TMEM252Q8N6L7 170 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
CCDC12-213ENST00000605875 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 TMEM189A5PLL7 270 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 H3BTX0 84 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 HBE1P02100 147 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 CXCL2P19875 107 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 HBG1P69891 147 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 HBG2P69892 147 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 PSG3Q16557 428 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 PKHD1P08F94 4074 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 DNAH11Q96DT5 4516 aa12.96□□□□□ -0.33
CCDC12-213ENST00000605875 BOLA2-SMG1P6H3BVE0 249 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 SLC17A3O00476 420 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 SPART-AS1P0CW21 52 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 FGF7P21781 194 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 S100A11P31949 105 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 OR8A1Q8NGG7 326 aa12.95□□□□□ -0.34
CCDC12-213ENST00000605875 TRAV12-2A0A075B6T6 113 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 INMT-MINDY4F8WBC2 141 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-213ENST00000605875 PRAF2O60831 178 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 B2MP61769 119 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 RRN3P1Q2M238 152 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 LGALS9BQ3B8N2 356 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 FAM222AQ5U5X8 452 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 Q6ZRG5 221 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
CCDC12-213ENST00000605875 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
CCDC12-213ENST00000605875 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-213ENST00000605875 TRAV5A0A0B4J249 113 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 RHOBP62745 196 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 OR1L4Q8NGR5 311 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 DNAJC4Q9NNZ3 241 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 OR5AC2Q9NZP5 309 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 DKK2Q9UBU2 259 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 YTHDF2Q9Y5A9 579 aaKnown RBP12.93□□□□□ -0.34
CCDC12-213ENST00000605875 PXMP4Q9Y6I8 212 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 MUC4Q99102 2169 aa12.93□□□□□ -0.34
CCDC12-213ENST00000605875 TEX48A0A1B0GUV7 120 aa12.92□□□□□ -0.34
CCDC12-213ENST00000605875 RPL29P47914 159 aaKnown RBP12.92□□□□□ -0.34
CCDC12-213ENST00000605875 UBE2DNLQ8IWF7 75 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms