RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 RPL29P47914 159 aaKnown RBP10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PRR20EP86478 221 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PRR20CP86479 221 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PRR20DP86480 221 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PRR20BP86481 221 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PRR20AP86496 221 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PSG9Q00887 426 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
TUBE1-208ENST00000604743 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 Q8NAQ8 132 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 PXMP4Q9Y6I8 212 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 RYR2Q92736 4967 aa10.45□□□□□ -0.74
TUBE1-208ENST00000604743 NUPR2A6NF83 97 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 MRPS12O15235 138 aaKnown RBP10.44□□□□□ -0.74
TUBE1-208ENST00000604743 MPC2O95563 127 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
TUBE1-208ENST00000604743 ZNF709Q8N972 641 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
TUBE1-208ENST00000604743 PFDN5Q99471 154 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 NPCDR1Q9BY65 106 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 MFFQ9GZY8 342 aa10.44□□□□□ -0.74
TUBE1-208ENST00000604743 JTBO76095 146 aa10.43□□□□□ -0.74
TUBE1-208ENST00000604743 PET100P0DJ07 73 aa10.43□□□□□ -0.74
TUBE1-208ENST00000604743 CXCL3P19876 107 aa10.43□□□□□ -0.74
TUBE1-208ENST00000604743 CNN1P51911 297 aaKnown RBP10.43□□□□□ -0.74
TUBE1-208ENST00000604743 PSG3Q16557 428 aa10.43□□□□□ -0.74
TUBE1-208ENST00000604743 MPDU1O75352 247 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 DUSP14O95147 198 aaKnown RBP10.42□□□□□ -0.74
TUBE1-208ENST00000604743 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
TUBE1-208ENST00000604743 GCSAMLQ5JQS6 135 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 LCN15Q6UWW0 184 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 MBD2Q9UBB5 411 aa10.42□□□□□ -0.74
TUBE1-208ENST00000604743 KLK5Q9Y337 293 aaPredicted RBP10.42□□□□□ -0.74
TUBE1-208ENST00000604743 ALMS1Q8TCU4 4167 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 SLC17A3O00476 420 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 RPL12P30050 165 aaKnown RBP10.41□□□□□ -0.74
TUBE1-208ENST00000604743 RHOBP62745 196 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 SPINK13Q1W4C9 94 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 CHAC2Q8WUX2 184 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 RPUSD4Q96CM3 377 aaKnown RBP10.41□□□□□ -0.74
TUBE1-208ENST00000604743 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 MED28Q9H204 178 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 PPP1R14DQ9NXH3 145 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
TUBE1-208ENST00000604743 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-208ENST00000604743 H3BQ15 152 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 M0R2Z0 102 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 CXCL2P19875 107 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 EMP1P54849 157 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 FCN2Q15485 313 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-208ENST00000604743 OR11H7Q8NGC8 314 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 ATP5SQ99766 215 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.74
TUBE1-208ENST00000604743 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-208ENST00000604743 GOLT1BQ9Y3E0 138 aa10.4□□□□□ -0.74
TUBE1-208ENST00000604743 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.75
TUBE1-208ENST00000604743 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 ZNF767PQ75MW2 155 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 TMEM208Q9BTX3 173 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 ZNF586Q9NXT0 402 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 DNAH1Q9P2D7 4330 aa10.39□□□□□ -0.75
TUBE1-208ENST00000604743 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 A8MTW9 85 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 IFNA5P01569 189 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 PYYP10082 97 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
TUBE1-208ENST00000604743 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 PRAC2D3DTV9 90 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 BOLA2-SMG1P6H3BVE0 249 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 HBE1P02100 147 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 AMBPP02760 352 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 GUK1Q16774 197 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 Q6ZTC4 211 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 MIR17HGQ75NE6 70 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 BLNKQ8WV28 456 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 SAT2Q96F10 170 aaPredicted RBP10.37□□□□□ -0.75
TUBE1-208ENST00000604743 IGF2BP2-AS1Q96M15 143 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 NEU1Q99519 415 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 RFNGQ9Y644 331 aa10.37□□□□□ -0.75
TUBE1-208ENST00000604743 LY6G6CO95867 125 aa10.36□□□□□ -0.75
TUBE1-208ENST00000604743 INSP01308 110 aa10.36□□□□□ -0.75
TUBE1-208ENST00000604743 HIST1H1EP10412 219 aaKnown RBP10.36□□□□□ -0.75
TUBE1-208ENST00000604743 FFAR4Q5NUL3 377 aa10.36□□□□□ -0.75
TUBE1-208ENST00000604743 OR10J6PQ8NGY7 276 aa10.36□□□□□ -0.75
TUBE1-208ENST00000604743 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms