RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
USE1-209ENST00000601592 GIG44P09565 113 aaPredicted RBP9.35□□□□□ -0.91
USE1-209ENST00000601592 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
USE1-209ENST00000601592 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
USE1-209ENST00000601592 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
USE1-209ENST00000601592 FXYD6-FXYD2A0A087WZ82 144 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 A0A0J9YX75 114 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
USE1-209ENST00000601592 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
USE1-209ENST00000601592 CXCL2P19875 107 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 Q5BKY6 102 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 SPATA31B1PQ5VZV4 182 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 OR2T35Q8NGX2 323 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 ASB13Q8WXK3 278 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 SLC35B3Q9H1N7 401 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
USE1-209ENST00000601592 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 H3BQ15 152 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 SLC17A3O00476 420 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 DEFB4AO15263 64 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 PSG9Q00887 426 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 HIST1H1AQ02539 215 aaPredicted RBP9.33□□□□□ -0.92
USE1-209ENST00000601592 PMS2P11Q13670 270 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 PSG3Q16557 428 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 INO80EQ8NBZ0 244 aaPredicted RBP9.33□□□□□ -0.92
USE1-209ENST00000601592 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 MFFQ9GZY8 342 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 HRH4Q9H3N8 390 aa9.33□□□□□ -0.92
USE1-209ENST00000601592 ZNF331Q9NQX6 463 aaPredicted RBP9.33□□□□□ -0.92
USE1-209ENST00000601592 CXorf65A6NEN9 183 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 DUSP14O95147 198 aaKnown RBP9.32□□□□□ -0.92
USE1-209ENST00000601592 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 PYYP10082 97 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 CNN1P51911 297 aaKnown RBP9.32□□□□□ -0.92
USE1-209ENST00000601592 RHOBP62745 196 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 GUK1Q16774 197 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
USE1-209ENST00000601592 PPP1R14DQ9NXH3 145 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 DNAH7Q8WXX0 4024 aa9.32□□□□□ -0.92
USE1-209ENST00000601592 ZNF266Q14584 549 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 OR8A1Q8NGG7 326 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 AQP10Q96PS8 301 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 MRPL32Q9BYC8 188 aaKnown RBP9.31□□□□□ -0.92
USE1-209ENST00000601592 ZNF586Q9NXT0 402 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 RFNGQ9Y644 331 aa9.31□□□□□ -0.92
USE1-209ENST00000601592 IGHV4-28A0A0C4DH34 117 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 ZNF705FA8MVS1 300 aaPredicted RBP9.3□□□□□ -0.92
USE1-209ENST00000601592 M0R2Z0 102 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 OR7C2O60412 319 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 HIST1H1EP10412 219 aaKnown RBP9.3□□□□□ -0.92
USE1-209ENST00000601592 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 PARD6GQ9BYG4 376 aaPredicted RBP9.3□□□□□ -0.92
USE1-209ENST00000601592 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
USE1-209ENST00000601592 TMEM14CQ9P0S9 112 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 FUT9Q9Y231 359 aa9.3□□□□□ -0.92
USE1-209ENST00000601592 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 ZNF705EA8MWA4 302 aaPredicted RBP9.29□□□□□ -0.92
USE1-209ENST00000601592 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 OR10J4P0C629 311 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 MIFP14174 115 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 ACOT6Q3I5F7 207 aaPredicted RBP9.29□□□□□ -0.92
USE1-209ENST00000601592 Q8NAQ8 132 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 SAT2Q96F10 170 aaPredicted RBP9.29□□□□□ -0.92
USE1-209ENST00000601592 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 GOLT1BQ9Y3E0 138 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 X6R8D5 127 aa9.29□□□□□ -0.92
USE1-209ENST00000601592 RNF222A6NCQ9 220 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 BOLA2-SMG1P6H3BVE0 249 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 ARPC5O15511 151 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 EIF3GO75821 320 aaKnown RBP eCLIP9.28□□□□□ -0.92
USE1-209ENST00000601592 TAS2R45P59539 299 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 UBE2L3P68036 154 aaKnown RBP9.28□□□□□ -0.92
USE1-209ENST00000601592 KHDC3LQ587J8 217 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 FAM122CQ6P4D5 195 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 AMTNQ6UX39 209 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 FAM167A-AS1Q96KT0 104 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
USE1-209ENST00000601592 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 A0A1W2PPV4 95 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 A8MTW9 85 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 M0R3E3 92 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 ZNF253O75346 499 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 INSP01308 110 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 AMBPP02760 352 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms