RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RNF24Q9Y225 148 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 HSPB11Q9Y547 144 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 UBE2L5PA0A1B0GUS4 154 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 F6UB75 175 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 H3BQ15 152 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.39
SSBP4-208ENST00000600628 SSNA1O43805 119 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF253O75346 499 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 OR5G3P0C626 314 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 MIFP14174 115 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 B2MP61769 119 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 RAB31Q13636 194 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 LRRC37A5PQ49AS3 106 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 C10orf113Q5VZT2 155 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 LCN15Q6UWW0 184 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 FAM167A-AS1Q96KT0 104 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 C16orf92Q96LL3 132 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 PFDN5Q99471 154 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 C1QTNF4Q9BXJ3 329 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 WDR61Q9GZS3 305 aaKnown RBP6.34□□□□□ -1.39
SSBP4-208ENST00000600628 TMEM14CQ9P0S9 112 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 MBD2Q9UBB5 411 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 PXMP4Q9Y6I8 212 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
SSBP4-208ENST00000600628 CXorf65A6NEN9 183 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 G3V3Q6 166 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 SLC17A3O00476 420 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 COX7A2P2O60397 106 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 JTBO76095 146 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 FGF7P21781 194 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 NUTF2P61970 127 aaKnown RBP6.33□□□□□ -1.4
SSBP4-208ENST00000600628 PMS2P11Q13670 270 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 FCN2Q15485 313 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 PSG3Q16557 428 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 GCSAMLQ5JQS6 135 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 FAM78BQ5VT40 261 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
SSBP4-208ENST00000600628 Q6ZRG5 221 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 C1orf158Q8N1D5 194 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 ASB13Q8WXK3 278 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 LINC00052Q96N35 136 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 WFDC1Q9HC57 220 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 XCL2Q9UBD3 114 aa6.33□□□□□ -1.4
SSBP4-208ENST00000600628 TRAV5A0A0B4J249 113 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 NDUFB4O95168 129 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 PET100P0DJ07 73 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 HLA-DMBP28068 263 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 RPL12P30050 165 aaKnown RBP6.32□□□□□ -1.4
SSBP4-208ENST00000600628 CNN1P51911 297 aaKnown RBP6.32□□□□□ -1.4
SSBP4-208ENST00000600628 PSG9Q00887 426 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 PDE6HQ13956 83 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 GUK1Q16774 197 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 Q5BKY6 102 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 OR8A1Q8NGG7 326 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 THAP6Q8TBB0 222 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 ATP5SQ99766 215 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 SLC50A1Q9BRV3 221 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 SLC35B3Q9H1N7 401 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 ZNF586Q9NXT0 402 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 CLEC5AQ9NY25 188 aa6.32□□□□□ -1.4
SSBP4-208ENST00000600628 TRBV19A0A075B6N1 114 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 DEFB4AO15263 64 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 GIPP09681 153 aaPredicted RBP6.31□□□□□ -1.4
SSBP4-208ENST00000600628 HIST1H1EP10412 219 aaKnown RBP6.31□□□□□ -1.4
SSBP4-208ENST00000600628 CLINT1Q14677 625 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 AKAP14Q86UN6 197 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 MRPL53Q96EL3 112 aaKnown RBP6.31□□□□□ -1.4
SSBP4-208ENST00000600628 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 SLC25A2Q9BXI2 301 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 MFFQ9GZY8 342 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 KLK5Q9Y337 293 aaPredicted RBP6.31□□□□□ -1.4
SSBP4-208ENST00000600628 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
SSBP4-208ENST00000600628 RNF222A6NCQ9 220 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 PRAC2D3DTV9 90 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 DUSP14O95147 198 aaKnown RBP6.3□□□□□ -1.4
SSBP4-208ENST00000600628 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
SSBP4-208ENST00000600628 EBLN2Q6P2I7 272 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 PHLDA1Q8WV24 401 aaPredicted RBP6.3□□□□□ -1.4
SSBP4-208ENST00000600628 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
SSBP4-208ENST00000600628 FAM19A4Q96LR4 140 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 IGF2BP2-AS1Q96M15 143 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 MED28Q9H204 178 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 KCNIP2Q9NS61 270 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 CELA1Q9UNI1 258 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
SSBP4-208ENST00000600628 NPIPB6E9PJ23 425 aa6.29□□□□□ -1.4
SSBP4-208ENST00000600628 BOLA2-SMG1P6H3BVE0 249 aa6.29□□□□□ -1.4
SSBP4-208ENST00000600628 IGKV3-20P01619 116 aa6.29□□□□□ -1.4
SSBP4-208ENST00000600628 AMBPP02760 352 aa6.29□□□□□ -1.4
SSBP4-208ENST00000600628 TSPOP30536 169 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 2523.6 ms