RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
VRK3-221ENST00000600284 LINC00305Q7Z4B0 112 aa11.25□□□□□ -0.61
VRK3-221ENST00000600284 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
VRK3-221ENST00000600284 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
VRK3-221ENST00000600284 NUDT15Q9NV35 164 aa11.25□□□□□ -0.61
VRK3-221ENST00000600284 TRAV6A0A075B6T7 132 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 FAM25EA8MYX2 175 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 M0R2Z0 102 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 PVALBP20472 110 aaPredicted RBP11.24□□□□□ -0.61
VRK3-221ENST00000600284 TSPOP30536 169 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 BPIFA4PQ86YQ2 179 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 C2orf50Q96LR7 162 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 MGST2Q99735 147 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
VRK3-221ENST00000600284 LSM5Q9Y4Y9 91 aaKnown RBP11.24□□□□□ -0.61
VRK3-221ENST00000600284 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 BOLA2-SMG1P6H3BVE0 249 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 H2AFB2P0C5Z0 115 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 BCAP31P51572 246 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 DAD1P61803 113 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 ZNF331Q9NQX6 463 aaPredicted RBP11.23□□□□□ -0.61
VRK3-221ENST00000600284 PPP1R14DQ9NXH3 145 aa11.23□□□□□ -0.61
VRK3-221ENST00000600284 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 CAMLGP49069 296 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 CAV2P51636 162 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 RHOBP62745 196 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
VRK3-221ENST00000600284 C10orf113Q5VZT2 155 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 Q6ZRG5 221 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
VRK3-221ENST00000600284 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
VRK3-221ENST00000600284 FAM240BA0A1B0GVZ2 78 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
VRK3-221ENST00000600284 S100A11P31949 105 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 IL15RAQ13261 267 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 VWC2Q2TAL6 325 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 CHAC2Q8WUX2 184 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 S100ZQ8WXG8 99 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 LYRM2Q9NU23 88 aaPredicted RBP11.21□□□□□ -0.61
VRK3-221ENST00000600284 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
VRK3-221ENST00000600284 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 FAM24AA6NFZ4 105 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 CST7O76096 145 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 CDKN1BP46527 198 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 RPL29P47914 159 aaKnown RBP11.2□□□□□ -0.62
VRK3-221ENST00000600284 SULT1A1P50225 295 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 TAS2R60P59551 318 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 RNF212Q495C1 297 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 PXMP4Q9Y6I8 212 aa11.2□□□□□ -0.62
VRK3-221ENST00000600284 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 IGLC2P0DOY2 106 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 HTN3P15516 51 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 HBG1P69891 147 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 HBG2P69892 147 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 ASAH1Q13510 395 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 OPCMLQ14982 345 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 GUK1Q16774 197 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 ATP6V1FQ16864 119 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 LINC01587Q99440 93 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 PFDN5Q99471 154 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
VRK3-221ENST00000600284 AZU1P20160 251 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 S100A10P60903 97 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 RAB32Q13637 225 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 MIC13Q5XKP0 118 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 STX12Q86Y82 276 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 UBE2DNLQ8IWF7 75 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
VRK3-221ENST00000600284 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
VRK3-221ENST00000600284 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 PRM2P04554 102 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 TMEM88Q6PEY1 159 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 ZNF493Q6ZR52 646 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 SLC39A9Q9NUM3 307 aa11.17□□□□□ -0.62
VRK3-221ENST00000600284 IGSF23A1L1A6 192 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 H3BQ15 152 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 H7BYZ3 331 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 SLC17A3O00476 420 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 ZNF253O75346 499 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 MPDU1O75352 247 aa11.16□□□□□ -0.62
VRK3-221ENST00000600284 SNRPCP09234 159 aaKnown RBP11.16□□□□□ -0.62
VRK3-221ENST00000600284 BAXQ07812 192 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms