RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
VRK3-220ENST00000600259 PRRT1Q99946 306 aa4.18□□□□□ -1.74
VRK3-220ENST00000600259 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
VRK3-220ENST00000600259 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
VRK3-220ENST00000600259 DUXBA0A1W2PPF3 345 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 GAGE12BA1L429 117 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 PRAC2D3DTV9 90 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 H7BYZ3 331 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 GAGE7O76087 117 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 HTN1P15515 57 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 AKR1C4P17516 323 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 RPL7P18124 248 aaKnown RBP4.17□□□□□ -1.74
VRK3-220ENST00000600259 CDKN1BP46527 198 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 RAB11AP62491 216 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 RHOBP62745 196 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
VRK3-220ENST00000600259 FGL1Q08830 312 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 Q5VSD8 79 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 ACOT7LQ6ZUV0 252 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 CLVS1Q8IUQ0 354 aaPredicted RBP4.17□□□□□ -1.74
VRK3-220ENST00000600259 ZNF738Q8NE65 137 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 OR10J6PQ8NGY7 276 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 OR1S1Q8NH92 325 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 AP3S1Q92572 193 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 RPUSD4Q96CM3 377 aaKnown RBP4.17□□□□□ -1.74
VRK3-220ENST00000600259 C20orf144Q9BQM9 153 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 TMEM147Q9BVK8 224 aa4.17□□□□□ -1.74
VRK3-220ENST00000600259 PARD6GQ9BYG4 376 aaPredicted RBP4.17□□□□□ -1.74
VRK3-220ENST00000600259 WRBO00258 174 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 SYNGR2O43760 224 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 HYPMO75409 117 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 SMIM18P0DKX4 95 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 SRPXP78539 464 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 ID3Q02535 119 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 DAZ2Q13117 558 aaKnown RBP4.16□□□□□ -1.74
VRK3-220ENST00000600259 GFI1BQ5VTD9 330 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 CYP2G1PQ6ZSU1 146 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 Q6ZTI0 123 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 C18orf15Q96N68 181 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 SCGB3A2Q96PL1 93 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 ZNF331Q9NQX6 463 aaPredicted RBP4.16□□□□□ -1.74
VRK3-220ENST00000600259 MDFICQ9P1T7 246 aa4.16□□□□□ -1.74
VRK3-220ENST00000600259 A0A087WTM6 91 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 K7EPK0 472 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 SIVA1O15304 175 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 MED6O75586 246 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 CCNKO75909 580 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.75
VRK3-220ENST00000600259 IL5P05113 134 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 DNAH10OSP0CZ25 163 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 CT45A10P0DMU9 189 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 SPCS2Q15005 226 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 CNPY1Q3B7I2 92 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 TMEM128Q5BJH2 165 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 SPANXN5Q5MJ07 72 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 CDPF1Q6NVV7 123 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 C11orf72Q8NBR9 251 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 ZNF431Q8TF32 576 aaPredicted RBP4.15□□□□□ -1.75
VRK3-220ENST00000600259 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.75
VRK3-220ENST00000600259 CIB3Q96Q77 187 aaPredicted RBP4.15□□□□□ -1.75
VRK3-220ENST00000600259 TMPRSS5Q9H3S3 457 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 PTTG2Q9NZH5 202 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 SCP2D1Q9UJQ7 156 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 PAIP2BQ9ULR5 123 aaKnown RBP4.15□□□□□ -1.75
VRK3-220ENST00000600259 RABL2BQ9UNT1 228 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 HIGD1AQ9Y241 93 aa4.15□□□□□ -1.75
VRK3-220ENST00000600259 LINC00854A0A1B0GVQ3 168 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 H3BP45 60 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 H3BQ15 152 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 SLC17A3O00476 420 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 RGS5O15539 181 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 ZNF324O75467 553 aaPredicted RBP4.14□□□□□ -1.75
VRK3-220ENST00000600259 ADAP1O75689 374 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 NXPH4O95158 308 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 SNRPCP09234 159 aaKnown RBP4.14□□□□□ -1.75
VRK3-220ENST00000600259 OR5G3P0C626 314 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 LINC00869P0C866 280 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 ANXA3P12429 323 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 CXCL2P19875 107 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 S100A7P31151 101 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 RAP2BP61225 183 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 SELENOTP62341 195 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 RPP30P78346 268 aaKnown RBP4.14□□□□□ -1.75
VRK3-220ENST00000600259 IL18Q14116 193 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 MORN5Q5VZ52 161 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 LYPD5Q6UWN5 251 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 TMED4Q7Z7H5 227 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 CCDC28AQ8IWP9 274 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 DYNC2LI1Q8TCX1 351 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 TMEM37Q8WXS4 190 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 FRZBQ92765 325 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 DIRAS2Q96HU8 199 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 ARV1Q9H2C2 271 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 GSN-AS1Q9NRJ2 163 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 PPP1R14DQ9NXH3 145 aa4.14□□□□□ -1.75
VRK3-220ENST00000600259 RABL2AQ9UBK7 228 aaPredicted RBP4.14□□□□□ -1.75
VRK3-220ENST00000600259 STRAPQ9Y3F4 350 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms