RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 RNF182Q8N6D2 247 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 OR1L4Q8NGR5 311 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 LINC00476Q8WZB0 136 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 PFDN5Q99471 154 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 SLC25A31Q9H0C2 315 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 SLC35B3Q9H1N7 401 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 DNAJC4Q9NNZ3 241 aa12.03□□□□□ -0.48
USHBP1-208ENST00000598309 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 CXCL3P19876 107 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 CNN1P51911 297 aaKnown RBP12.02□□□□□ -0.49
USHBP1-208ENST00000598309 H2BFSP57053 126 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 FXYD7P58549 80 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 B2MP61769 119 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 IGFL4Q6B9Z1 124 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 ZNF738Q8NE65 137 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 SLC50A1Q9BRV3 221 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
USHBP1-208ENST00000598309 ALMS1Q8TCU4 4167 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 SSNA1O43805 119 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 AMBPP02760 352 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 FGF7P21781 194 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 LRRC37A5PQ49AS3 106 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 LRRC20Q8TCA0 184 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 PXMP4Q9Y6I8 212 aa12.01□□□□□ -0.49
USHBP1-208ENST00000598309 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 TMEM189A5PLL7 270 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 H0YIZ8 118 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 IGLC2P0DOY2 106 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 HLA-DMBP28068 263 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 PSG3Q16557 428 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 MORN5Q5VZ52 161 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 OR11H7Q8NGC8 314 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 OR5C1Q8NGR4 320 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 IGF2BP2-AS1Q96M15 143 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 NPCDR1Q9BY65 106 aa12□□□□□ -0.49
USHBP1-208ENST00000598309 ZNF331Q9NQX6 463 aaPredicted RBP12□□□□□ -0.49
USHBP1-208ENST00000598309 PLECQ15149 4684 aaKnown RBP11.99□□□□□ -0.49
USHBP1-208ENST00000598309 PET100P0DJ07 73 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 TCTAP57738 103 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 NHLH2Q02577 135 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 OR8A1Q8NGG7 326 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 RFNGQ9Y644 331 aa11.99□□□□□ -0.49
USHBP1-208ENST00000598309 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 BOLA2-SMG1P6H3BVE0 249 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 GUK1Q16774 197 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 C1orf158Q8N1D5 194 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 KCNIP2Q9NS61 270 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 CELA1Q9UNI1 258 aa11.98□□□□□ -0.49
USHBP1-208ENST00000598309 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 MPC2O95563 127 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 PTTG1O95997 202 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 INSP01308 110 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 HBE1P02100 147 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 HIST1H1AQ02539 215 aaPredicted RBP11.97□□□□□ -0.49
USHBP1-208ENST00000598309 Q6ZTC4 211 aa11.97□□□□□ -0.49
USHBP1-208ENST00000598309 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
USHBP1-208ENST00000598309 SLC17A3O00476 420 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 ZNF253O75346 499 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 LY6G6CO95867 125 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 CLINT1Q14677 625 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 SPINK13Q1W4C9 94 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 THAP6Q8TBB0 222 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 SAT2Q96F10 170 aaPredicted RBP11.96□□□□□ -0.49
USHBP1-208ENST00000598309 RNF126Q9BV68 326 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 TMEM14CQ9P0S9 112 aa11.96□□□□□ -0.49
USHBP1-208ENST00000598309 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 H3BQ15 152 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 M0R2Z0 102 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 CRXO43186 299 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-208ENST00000598309 SPART-AS1P0CW21 52 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 TMEM208Q9BTX3 173 aa11.95□□□□□ -0.5
USHBP1-208ENST00000598309 WDR61Q9GZS3 305 aaKnown RBP11.95□□□□□ -0.5
USHBP1-208ENST00000598309 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
USHBP1-208ENST00000598309 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
USHBP1-208ENST00000598309 ATP5SQ99766 215 aa11.94□□□□□ -0.5
USHBP1-208ENST00000598309 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
USHBP1-208ENST00000598309 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
USHBP1-208ENST00000598309 H3BTX0 84 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 EMP1P54849 157 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 RHOBP62745 196 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 PDE6HQ13956 83 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 BAP18Q8IXM2 172 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
USHBP1-208ENST00000598309 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 IGLL5B9A064 214 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 C17orf112F2Z3M2 114 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms