RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 LINC00305Q7Z4B0 112 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 ZNF738Q8NE65 137 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 CAV2P51636 162 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 RAB31Q13636 194 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 VWC2Q2TAL6 325 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 BPIFA4PQ86YQ2 179 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 OR8A1Q8NGG7 326 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 TMEM37Q8WXS4 190 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 NIPSNAP3BQ9BS92 247 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 LYRM2Q9NU23 88 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-203ENST00000597209 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 INSP01308 110 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 CAMLGP49069 296 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 SPINK13Q1W4C9 94 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 LCN15Q6UWW0 184 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 SLC50A1Q9BRV3 221 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 ZNF331Q9NQX6 463 aaPredicted RBP12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
CHMP2A-203ENST00000597209 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 M0R2Z0 102 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 CST7O76096 145 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 S100A11P31949 105 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 SULT1A1P50225 295 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 Q6ZRG5 221 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
CHMP2A-203ENST00000597209 P0DMU3 169 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 FAM231AP0DMU4 169 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 FAM231CP0DMU5 169 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 TSPOP30536 169 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 HIST1H1AQ02539 215 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 RAB32Q13637 225 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 ATP6V1FQ16864 119 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 RPUSD4Q96CM3 377 aaKnown RBP12.76□□□□□ -0.37
CHMP2A-203ENST00000597209 A6NHS1 94 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 UPK1BO75841 260 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 S100A10P60903 97 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 RHOBP62745 196 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 HBG1P69891 147 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 HBG2P69892 147 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 OPCMLQ14982 345 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 MIC13Q5XKP0 118 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 TMEM256Q8N2U0 113 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 GPN1Q9HCN4 374 aaPredicted RBP12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 DNAH6Q9C0G6 4158 aa12.75□□□□□ -0.37
CHMP2A-203ENST00000597209 IGSF23A1L1A6 192 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 IGLC2P0DOY2 106 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 MORN5Q5VZ52 161 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 STX12Q86Y82 276 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 BAP18Q8IXM2 172 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 SAT2Q96F10 170 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 PFDN5Q99471 154 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 PLA2G2EQ9NZK7 142 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 DNAH10Q8IVF4 4471 aa12.74□□□□□ -0.37
CHMP2A-203ENST00000597209 LYRM9A8MSI8 78 aa12.73□□□□□ -0.37
CHMP2A-203ENST00000597209 ZNF705GA8MUZ8 300 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-203ENST00000597209 GUK1Q16774 197 aa12.73□□□□□ -0.37
CHMP2A-203ENST00000597209 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
CHMP2A-203ENST00000597209 FRAS1Q86XX4 4008 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 MPDU1O75352 247 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 CDKN1BP46527 198 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 DAD1P61803 113 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 BAXQ07812 192 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 PTTG2Q9NZH5 202 aa12.72□□□□□ -0.37
CHMP2A-203ENST00000597209 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 H3BQ15 152 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 SLC17A3O00476 420 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 PRAF2O60831 178 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 TAS2R60P59551 318 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
CHMP2A-203ENST00000597209 PLAC8L1A1L4L8 177 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 ZNF253O75346 499 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 RLN2P04090 185 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 SNRPCP09234 159 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 IFITM3Q01628 133 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 LINC01587Q99440 93 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 NMES1Q9C002 83 aa12.7□□□□□ -0.38
CHMP2A-203ENST00000597209 TRAV5A0A0B4J249 113 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 E5RGE8 158 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 PRM2P04554 102 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms