RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
PNKP-206ENST00000595792 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
PNKP-206ENST00000595792 SIX6O95475 246 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 PRM2P04554 102 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 CXCL3P19876 107 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 S100A10P60903 97 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
PNKP-206ENST00000595792 M0R2Z0 102 aa12.71□□□□□ -0.37
PNKP-206ENST00000595792 DEFA1P59665 94 aa12.71□□□□□ -0.37
PNKP-206ENST00000595792 DEFA3P59666 94 aa12.71□□□□□ -0.37
PNKP-206ENST00000595792 NRARPQ7Z6K4 114 aa12.71□□□□□ -0.37
PNKP-206ENST00000595792 GPN1Q9HCN4 374 aaPredicted RBP12.71□□□□□ -0.37
PNKP-206ENST00000595792 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
PNKP-206ENST00000595792 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 CAMLGP49069 296 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 OPCMLQ14982 345 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 PXDC1Q5TGL8 231 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 KRTAP17-1Q9BYP8 105 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
PNKP-206ENST00000595792 TRAV5A0A0B4J249 113 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 H3BTX0 84 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 SLC17A3O00476 420 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 SPART-AS1P0CW21 52 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 SULT1A1P50225 295 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 PSG3Q16557 428 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 UQCC1Q9NVA1 299 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 DKK2Q9UBU2 259 aa12.69□□□□□ -0.38
PNKP-206ENST00000595792 KIAA1109Q2LD37 5005 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 H0YIZ8 118 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
PNKP-206ENST00000595792 PVALBP20472 110 aaPredicted RBP12.68□□□□□ -0.38
PNKP-206ENST00000595792 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 OR8A1Q8NGG7 326 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
PNKP-206ENST00000595792 GOLT1BQ9Y3E0 138 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
PNKP-206ENST00000595792 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 TMEM189A5PLL7 270 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 H3BQ15 152 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 M0R2N4 97 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 PRAF2O60831 178 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 HTN3P15516 51 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 NHLH2Q02577 135 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 SAT2Q96F10 170 aaPredicted RBP12.67□□□□□ -0.38
PNKP-206ENST00000595792 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 RNF24Q9Y225 148 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
PNKP-206ENST00000595792 DNAH17Q9UFH2 4485 aa12.67□□□□□ -0.38
PNKP-206ENST00000595792 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
PNKP-206ENST00000595792 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 S100A11P31949 105 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 HIST1H1AQ02539 215 aaPredicted RBP12.66□□□□□ -0.38
PNKP-206ENST00000595792 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
PNKP-206ENST00000595792 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 DNAJC4Q9NNZ3 241 aa12.66□□□□□ -0.38
PNKP-206ENST00000595792 BOLA2-SMG1P6H3BVE0 249 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 HBE1P02100 147 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 P0DMU3 169 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
PNKP-206ENST00000595792 BAXQ07812 192 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 SLC39A9Q9NUM3 307 aa12.65□□□□□ -0.38
PNKP-206ENST00000595792 PKHD1P08F94 4074 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 CXCL2P19875 107 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 AZU1P20160 251 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 FGF7P21781 194 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 H2BFSP57053 126 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 B2MP61769 119 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 LRRC37A5PQ49AS3 106 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 STX12Q86Y82 276 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 LRRC20Q8TCA0 184 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 CHAC2Q8WUX2 184 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 PARD6GQ9BYG4 376 aaPredicted RBP12.64□□□□□ -0.39
PNKP-206ENST00000595792 NMES1Q9C002 83 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
PNKP-206ENST00000595792 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms