RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
ZNF541-205ENST00000595558 VKORC1Q9BQB6 163 aa12.12□□□□□ -0.47
ZNF541-205ENST00000595558 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
ZNF541-205ENST00000595558 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
ZNF541-205ENST00000595558 NDUFS7O75251 213 aa12.11□□□□□ -0.47
ZNF541-205ENST00000595558 CHCHD1Q96BP2 118 aaKnown RBP12.11□□□□□ -0.47
ZNF541-205ENST00000595558 INSIG2Q9Y5U4 225 aa12.11□□□□□ -0.47
ZNF541-205ENST00000595558 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
ZNF541-205ENST00000595558 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
ZNF541-205ENST00000595558 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
ZNF541-205ENST00000595558 NUDT3O95989 172 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 FAM106CPP0CH98 169 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 PLP1P60201 277 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 CBY1Q9Y3M2 126 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 POLQO75417 2590 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 I3L2K1 104 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 IGLV1-47P01700 117 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 CRIP1P50238 77 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 ARF6P62330 175 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 ADORA2A-AS1P86434 159 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 KLRD1Q13241 179 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 GFRA4Q9GZZ7 299 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 HILPDAQ9Y5L2 63 aa12.1□□□□□ -0.47
ZNF541-205ENST00000595558 M0R3E3 92 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 SNAI2O43623 268 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 HTR1DP28221 377 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 PCP4P48539 62 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 ONECUT1Q9UBC0 465 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 ACACBO00763 2458 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 HAX1O00165 279 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 NCR2O95944 276 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 RBPJQ06330 500 aa12.09□□□□□ -0.47
ZNF541-205ENST00000595558 ZNF672Q499Z4 452 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 USP9XQ93008 2570 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-205ENST00000595558 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 A0A1W2PPR1 153 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 MUC21Q5SSG8 566 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 RASL11BQ9BPW5 248 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 ST20Q9HBF5 79 aa12.08□□□□□ -0.47
ZNF541-205ENST00000595558 A0A087X0K7 114 aa12.08□□□□□ -0.48
ZNF541-205ENST00000595558 C16orf54Q6UWD8 224 aa12.08□□□□□ -0.48
ZNF541-205ENST00000595558 NGBQ9NPG2 151 aa12.08□□□□□ -0.48
ZNF541-205ENST00000595558 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.48
ZNF541-205ENST00000595558 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 PPIAL4GP0DN37 164 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 HOXB4P17483 251 aaPredicted RBP12.07□□□□□ -0.48
ZNF541-205ENST00000595558 RBX1P62877 108 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 PLGLAQ15195 96 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 BVES-AS1Q5T3Y7 98 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 C1RLQ9NZP8 487 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 TRBV19A0A075B6N1 114 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 B9A039 149 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 TAX1BP3O14907 124 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 FXYD7P58549 80 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
ZNF541-205ENST00000595558 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 C8orf49Q96NF6 230 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 MAP1LC3CQ9BXW4 147 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 MSRB2Q9Y3D2 182 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 ZANQ9Y493 2812 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 IGHV2-70DA0A0C4DH43 119 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 A0A1B0GUT8 65 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 OR2T8A6NH00 312 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 K7EIM0 57 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 LIPFP07098 398 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 TCTAP57738 103 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 VAMP3Q15836 100 aa12.07□□□□□ -0.48
ZNF541-205ENST00000595558 NHLH1Q02575 133 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 FAM231BA6NCW3 169 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 CBY3A6NI87 242 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 PSG8Q9UQ74 426 aa12.06□□□□□ -0.48
ZNF541-205ENST00000595558 CNIH1O95406 144 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 IL4P05112 153 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 RPEQ96AT9 228 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
ZNF541-205ENST00000595558 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
ZNF541-205ENST00000595558 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
ZNF541-205ENST00000595558 ZNF491Q8N8L2 437 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 TMEM213A2RRL7 107 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 TIMM23O14925 209 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms