RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 IGHV3OR16-13A0A075B7E8 117 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 IGHV3-74A0A0B4J1X5 117 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 C9JCJ5 164 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 HAX1O00165 279 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 PEX7O00628 323 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
VRK3-207ENST00000594092 PROK1P58294 105 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 LINC01551Q86U37 167 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 DEFB136Q30KP8 78 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
VRK3-207ENST00000594092 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 TSPAN4O14817 238 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 HOXD3P31249 432 aaPredicted RBP11.59□□□□□ -0.55
VRK3-207ENST00000594092 GNG4P50150 75 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
VRK3-207ENST00000594092 PDE6HQ13956 83 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 RNF212Q495C1 297 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 TM4SF20Q53R12 229 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 CTDSP1Q9GZU7 261 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
VRK3-207ENST00000594092 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.55
VRK3-207ENST00000594092 K7EMT4 169 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 C15orf54Q8N8G6 183 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 GPR82Q96P67 336 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
VRK3-207ENST00000594092 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.56
VRK3-207ENST00000594092 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
VRK3-207ENST00000594092 TAS2R60P59551 318 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 GNG5P63218 68 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 C16orf54Q6UWD8 224 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 CITED2Q99967 270 aaPredicted RBP11.58□□□□□ -0.56
VRK3-207ENST00000594092 ATG101Q9BSB4 218 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
VRK3-207ENST00000594092 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 LINC01619G3V211 115 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 REC114Q7Z4M0 266 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 OR11H1Q8NG94 326 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 OCC1Q8TAD7 63 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
VRK3-207ENST00000594092 UFC1Q9Y3C8 167 aa11.57□□□□□ -0.56
VRK3-207ENST00000594092 TEP1Q99973 2627 aaKnown RBP11.57□□□□□ -0.56
VRK3-207ENST00000594092 LGALS9O00182 355 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 SLC17A3O00476 420 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 GALR1P47211 349 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 PSG9Q00887 426 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
VRK3-207ENST00000594092 C8orf86Q6ZUL3 223 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 OR1N2Q8NGR9 330 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
VRK3-207ENST00000594092 A0A1W2PRX2 142 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 A0A1W2PS18 150 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 TCRAP04437 139 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 S100A9P06702 114 aaKnown RBP11.56□□□□□ -0.56
VRK3-207ENST00000594092 EDN2P20800 178 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 SLURP1P55000 103 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 UBE2G1P62253 170 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 C1QL4Q86Z23 238 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 DPF1Q92782 380 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
VRK3-207ENST00000594092 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 A0A087X0K7 114 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 TMEM213A2RRL7 107 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 COLCA2A8K830 154 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 A8MWP6 167 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 H7BYZ3 331 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 ZNF253O75346 499 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 TMEM183BQ1AE95 376 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 GRAMD2BQ96HH9 432 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 MAST4O15021 2626 aa11.55□□□□□ -0.56
VRK3-207ENST00000594092 CHEK1O14757 476 aa11.54□□□□□ -0.56
VRK3-207ENST00000594092 PPP1R2P9O14990 202 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms