RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 A0A087WW49 117 aa15.1■□□□□ 0.01
LSM4-203ENST00000593829 PLEKHA3Q9HB20 300 aa15.1■□□□□ 0.01
LSM4-203ENST00000593829 M0R143 59 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 SELENOTP62341 195 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 ZNF320A2RRD8 509 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 NDUFB8O95169 186 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 ESDP10768 282 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 IGLL1P15814 213 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 SNHG12Q9BXW3 62 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 THYN1Q9P016 225 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 PEF1Q9UBV8 284 aaKnown RBP15.09■□□□□ 0.01
LSM4-203ENST00000593829 NAGKQ9UJ70 344 aa15.09■□□□□ 0.01
LSM4-203ENST00000593829 F11RQ9Y624 299 aaKnown RBP15.09■□□□□ 0.01
LSM4-203ENST00000593829 C15orf62A8K5M9 175 aa15.08■□□□□ 0
LSM4-203ENST00000593829 RAB4AP20338 218 aa15.08■□□□□ 0
LSM4-203ENST00000593829 OXLD1Q5BKU9 147 aa15.08■□□□□ 0
LSM4-203ENST00000593829 MCRIP2Q9BUT9 160 aaKnown RBP15.08■□□□□ 0
LSM4-203ENST00000593829 G3V4G9 280 aa15.07■□□□□ 0
LSM4-203ENST00000593829 ERHP84090 104 aaKnown RBP15.07■□□□□ 0
LSM4-203ENST00000593829 SPINK9Q5DT21 86 aa15.07■□□□□ 0
LSM4-203ENST00000593829 SAMD5Q5TGI4 173 aa15.07■□□□□ 0
LSM4-203ENST00000593829 OR1L6Q8NGR2 347 aa15.07■□□□□ 0
LSM4-203ENST00000593829 OR52E5Q8NH55 327 aa15.07■□□□□ 0
LSM4-203ENST00000593829 SFRP2Q96HF1 295 aa15.07■□□□□ 0
LSM4-203ENST00000593829 OPRK1P41145 380 aa15.07■□□□□ 0
LSM4-203ENST00000593829 SLURP1P55000 103 aa15.07■□□□□ 0
LSM4-203ENST00000593829 PAFAH1B2P68402 229 aa15.07■□□□□ 0
LSM4-203ENST00000593829 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.06■□□□□ 0
LSM4-203ENST00000593829 INS-IGF2F8WCM5 200 aa15.06■□□□□ 0
LSM4-203ENST00000593829 EEF1AKMT3Q96AZ1 226 aa15.06■□□□□ 0
LSM4-203ENST00000593829 ENY2Q9NPA8 101 aa15.06■□□□□ 0
LSM4-203ENST00000593829 SCGB1D1O95968 90 aa15.05■□□□□ 0
LSM4-203ENST00000593829 HOXD3P31249 432 aaPredicted RBP15.05■□□□□ 0
LSM4-203ENST00000593829 ATP5G3P48201 142 aa15.05■□□□□ 0
LSM4-203ENST00000593829 RPP30P78346 268 aaKnown RBP15.05■□□□□ 0
LSM4-203ENST00000593829 PDLIM3Q53GG5 364 aaPredicted RBP15.05■□□□□ 0
LSM4-203ENST00000593829 ZNF114Q8NC26 417 aa15.05■□□□□ 0
LSM4-203ENST00000593829 DLX4Q92988 240 aaPredicted RBP15.05■□□□□ 0
LSM4-203ENST00000593829 C20orf144Q9BQM9 153 aa15.05■□□□□ 0
LSM4-203ENST00000593829 NDUFB4O95168 129 aa15.05■□□□□ -0
LSM4-203ENST00000593829 TRBV12-3P01733 135 aa15.05■□□□□ -0
LSM4-203ENST00000593829 STAG3L2P0CL84 134 aa15.05■□□□□ -0
LSM4-203ENST00000593829 STAG3L3P0CL85 134 aa15.05■□□□□ -0
LSM4-203ENST00000593829 MFAP2P55001 183 aa15.05■□□□□ -0
LSM4-203ENST00000593829 LY96Q9Y6Y9 160 aa15.05■□□□□ -0
LSM4-203ENST00000593829 A0A1W2PPV4 95 aa15.04■□□□□ -0
LSM4-203ENST00000593829 S4R3C0 116 aa15.04■□□□□ -0
LSM4-203ENST00000593829 TRBV7-1A0A0A6YYK4 115 aa15.04■□□□□ -0
LSM4-203ENST00000593829 OVOL1O14753 267 aa15.04■□□□□ -0
LSM4-203ENST00000593829 IGHV3-23P01764 117 aa15.04■□□□□ -0
LSM4-203ENST00000593829 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
LSM4-203ENST00000593829 VN1R17PQ8TDU5 208 aa15.04■□□□□ -0
LSM4-203ENST00000593829 NOTCH3Q9UM47 2321 aa15.03■□□□□ -0
LSM4-203ENST00000593829 CXorf1O96002 111 aa15.03■□□□□ -0
LSM4-203ENST00000593829 CST9LP1Q5W188 147 aa15.03■□□□□ -0
LSM4-203ENST00000593829 CMTM2Q8TAZ6 248 aa15.03■□□□□ -0
LSM4-203ENST00000593829 CCDC140Q96MF4 163 aa15.03■□□□□ -0
LSM4-203ENST00000593829 BMPR1BO00238 502 aa15.02■□□□□ -0
LSM4-203ENST00000593829 BTF3P20290 206 aaKnown RBP15.02■□□□□ -0
LSM4-203ENST00000593829 ADMP35318 185 aa15.02■□□□□ -0
LSM4-203ENST00000593829 SUB1P53999 127 aaKnown RBP eCLIP15.02■□□□□ -05e-12■■■■■ 99.5
LSM4-203ENST00000593829 RPEL1Q2QD12 228 aa15.02■□□□□ -0
LSM4-203ENST00000593829 CLEC19AQ6UXS0 136 aa15.02■□□□□ -0
LSM4-203ENST00000593829 TEX43Q6ZNM6 134 aa15.02■□□□□ -0
LSM4-203ENST00000593829 OR10G8Q8NGN5 311 aa15.02■□□□□ -0
LSM4-203ENST00000593829 C11orf52Q96A22 123 aa15.02■□□□□ -0
LSM4-203ENST00000593829 PPP1R14DQ9NXH3 145 aa15.02■□□□□ -0
LSM4-203ENST00000593829 RANP62826 216 aaKnown RBP15.02□□□□□ -0.01
LSM4-203ENST00000593829 BEAN1Q3B7T3 259 aa15.02□□□□□ -0.01
LSM4-203ENST00000593829 KPRPQ5T749 579 aaPredicted RBP15.02□□□□□ -0.01
LSM4-203ENST00000593829 ZNF502Q8TBZ5 544 aa15.02□□□□□ -0.01
LSM4-203ENST00000593829 IL36BQ9NZH7 164 aa15.02□□□□□ -0.01
LSM4-203ENST00000593829 TRBV20OR9-2A0A075B6H5 130 aa15.01□□□□□ -0.01
LSM4-203ENST00000593829 C9JCJ5 164 aa15.01□□□□□ -0.01
LSM4-203ENST00000593829 PRSS46E5RG02 174 aa15.01□□□□□ -0.01
LSM4-203ENST00000593829 KLF5Q13887 457 aaPredicted RBP15.01□□□□□ -0.01
LSM4-203ENST00000593829 DERL1Q9BUN8 251 aa15.01□□□□□ -0.01
LSM4-203ENST00000593829 HEYLQ9NQ87 328 aaPredicted RBP15.01□□□□□ -0.01
LSM4-203ENST00000593829 NOTCH1P46531 2555 aa15□□□□□ -0.01
LSM4-203ENST00000593829 NUPR1O60356 82 aa15□□□□□ -0.01
LSM4-203ENST00000593829 ARL3P36405 182 aa15□□□□□ -0.01
LSM4-203ENST00000593829 C9orf66Q5T8R8 295 aa15□□□□□ -0.01
LSM4-203ENST00000593829 ARL2-SNX15V9GYD0 113 aa15□□□□□ -0.01
LSM4-203ENST00000593829 K7EIM0 57 aa15□□□□□ -0.01
LSM4-203ENST00000593829 CLEC3BP05452 202 aa15□□□□□ -0.01
LSM4-203ENST00000593829 SYNJ2BPP57105 145 aa15□□□□□ -0.01
LSM4-203ENST00000593829 UBE2G2P60604 165 aa15□□□□□ -0.01
LSM4-203ENST00000593829 Q0VG73 95 aa15□□□□□ -0.01
LSM4-203ENST00000593829 GAGE1Q13065 139 aa15□□□□□ -0.01
LSM4-203ENST00000593829 GGTLC1Q9BX51 225 aa15□□□□□ -0.01
LSM4-203ENST00000593829 TP53TG3Q9ULZ0 132 aa15□□□□□ -0.01
LSM4-203ENST00000593829 IGHV3-21A0A0B4J1V1 117 aa14.99□□□□□ -0.01
LSM4-203ENST00000593829 RNASE2P10153 161 aaKnown RBP14.99□□□□□ -0.01
LSM4-203ENST00000593829 GCSAMLQ5JQS6 135 aa14.99□□□□□ -0.01
LSM4-203ENST00000593829 MIEN1Q9BRT3 115 aa14.99□□□□□ -0.01
LSM4-203ENST00000593829 C21orf62Q9NYP8 219 aa14.99□□□□□ -0.01
LSM4-203ENST00000593829 I3L2K1 104 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 ARL14EPLP0DKL9 152 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 GPR183P32249 361 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 OCC1Q8TAD7 63 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms