RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 TMEM189A5PLL7 270 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 CCSO14618 274 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
H3F3B-213ENST00000593254 CD300CQ08708 224 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 ARL16Q0P5N6 197 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 AMTNQ6UX39 209 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 ZNF767PQ75MW2 155 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 UHRF2Q96PU4 802 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 RNF126Q9BV68 326 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 GGACTQ9BVM4 153 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 NUDT15Q9NV35 164 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 ALG5Q9Y673 324 aa9.45□□□□□ -0.9
H3F3B-213ENST00000593254 HERC1Q15751 4861 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 IGHV3OR16-12A0A075B7B8 117 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 OR5G3P0C626 314 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 SLC38A11Q08AI6 406 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 ZFP69Q49AA0 526 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 PATE2Q6UY27 113 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 S100A7AQ86SG5 101 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
H3F3B-213ENST00000593254 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
H3F3B-213ENST00000593254 A0A087X0K7 114 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 RGS13O14921 159 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 AMBPP02760 352 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 CNN1P51911 297 aaKnown RBP9.43□□□□□ -0.9
H3F3B-213ENST00000593254 FGL1Q08830 312 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 PXDC1Q5TGL8 231 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 ZNF546Q86UE3 836 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 ARL6Q9H0F7 186 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 ARV1Q9H2C2 271 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 LRP1BQ9NZR2 4599 aa9.43□□□□□ -0.9
H3F3B-213ENST00000593254 FAM25EA8MYX2 175 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 L7N2F9 121 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 GOSR2O14653 212 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 AGPAT2O15120 278 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
H3F3B-213ENST00000593254 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
H3F3B-213ENST00000593254 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 EMP1P54849 157 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 VAMP2P63027 116 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 C12orf45Q8N5I9 185 aaPredicted RBP9.42□□□□□ -0.9
H3F3B-213ENST00000593254 OR11H7Q8NGC8 314 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 IGF2BP2-AS1Q96M15 143 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 RNF24Q9Y225 148 aa9.42□□□□□ -0.9
H3F3B-213ENST00000593254 LSM5Q9Y4Y9 91 aaKnown RBP9.42□□□□□ -0.9
H3F3B-213ENST00000593254 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 C5orf51A6NDU8 294 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 HBE1P02100 147 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 C1QBP02746 253 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 H2AFB2P0C5Z0 115 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 CXCL3P19876 107 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 C2orf50Q96LR7 162 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 MGST2Q99735 147 aa9.41□□□□□ -0.9
H3F3B-213ENST00000593254 LOC102723971A0A1B0GUV8 181 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 M0R2Z0 102 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 RTL8CO15255 209 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
H3F3B-213ENST00000593254 CAV2P51636 162 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 IL15RAQ13261 267 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 SPINK13Q1W4C9 94 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 LINC00305Q7Z4B0 112 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.9
H3F3B-213ENST00000593254 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 CST7O76096 145 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 INSP01308 110 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 CXCL2P19875 107 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 PSG3Q16557 428 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 LCN15Q6UWW0 184 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 HYLS1Q96M11 299 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 TMEM208Q9BTX3 173 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 NDUFAF3Q9BU61 184 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 MED28Q9H204 178 aa9.39□□□□□ -0.91
H3F3B-213ENST00000593254 LYRM2Q9NU23 88 aaPredicted RBP9.39□□□□□ -0.91
H3F3B-213ENST00000593254 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
H3F3B-213ENST00000593254 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
H3F3B-213ENST00000593254 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
H3F3B-213ENST00000593254 PVALBP20472 110 aaPredicted RBP9.38□□□□□ -0.91
H3F3B-213ENST00000593254 CAMLGP49069 296 aa9.38□□□□□ -0.91
H3F3B-213ENST00000593254 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
H3F3B-213ENST00000593254 RAB32Q13637 225 aa9.38□□□□□ -0.91
H3F3B-213ENST00000593254 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms