RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TMSB15BA0A087X1C1 80 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 CCL25O15444 150 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 CRXO43186 299 aaPredicted RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 PSG1P11464 419 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 KIR3DS1Q14943 382 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 KLF17Q5JT82 389 aaPredicted RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 FAM104BQ5XKR9 115 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 C8orf86Q6ZUL3 223 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 OR10J6PQ8NGY7 276 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 FNDC4Q9H6D8 234 aaPredicted RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 LINC00574Q9H8X3 128 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 PCNX3Q9H6A9 2034 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 DOCK11Q5JSL3 2073 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 F8W1H4 67 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 TMEM178BH3BS89 294 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 K7EMI3 77 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 LHBP01229 141 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 ID1P41134 155 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 LEPP41159 167 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SMAGPQ0VAQ4 97 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 BCL6BQ8N143 479 aaPredicted RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 EEF1AKMT3Q96AZ1 226 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 FOXC2Q99958 501 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SDK1Q7Z5N4 2213 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 URB1O60287 2271 aaKnown RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 A0A087X0K7 114 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SH2D7A6NKC9 451 aaPredicted RBP2.85□□□□□ -1.95
VMP1-216ENST00000592790 D6R8Y8 96 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 NDUFB8O95169 186 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 COX6CP09669 75 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 DLX1P56177 255 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 Q1RN00 199 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 TMEM200BQ69YZ2 307 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 EBLN2Q6P2I7 272 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 ZNF562Q6V9R5 426 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SYT8Q8NBV8 401 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SCRT2Q9NQ03 307 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 SIGLEC9Q9Y336 463 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 FREM2Q5SZK8 3169 aa2.85□□□□□ -1.95
VMP1-216ENST00000592790 TRBV19A0A075B6N1 114 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 IGHV3-21A0A0B4J1V1 117 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 A0A1B0GXF2 115 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 A0A1W2PPI3 338 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 PSMB11A5LHX3 300 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 NKX2-8O15522 239 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 IGKV1-16P04430 117 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 ZNF134P52741 427 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 LAGE3Q14657 143 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 GAGE13Q4V321 117 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 MBD6Q96DN6 1003 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 FAM167A-AS1Q96KT0 104 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 ZNF747Q9BV97 191 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 HIGD1BQ9P298 99 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 SDK2Q58EX2 2172 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 IGHV3-72A0A0B4J1Y9 119 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 CCL3L1P16619 93 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 LYZL1Q6UWQ5 148 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 NEU4Q8WWR8 484 aaPredicted RBP2.84□□□□□ -1.95
VMP1-216ENST00000592790 SPANXDQ9BXN6 97 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 FBXL15Q9H469 300 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 TMEM160Q9NX00 188 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 KAAG1Q9UBP8 84 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 ZNF462Q96JM2 2506 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 IGHV1-3A0A0C4DH29 117 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 C2orf70A6NJV1 201 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 H3BRN7 92 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 M0QZ24 198 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 HOXA3O43365 443 aaPredicted RBP2.84□□□□□ -1.95
VMP1-216ENST00000592790 SH2D1AO60880 128 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 PSMB2P49721 201 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 TDRG1Q3Y452 100 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 TMEM155Q4W5P6 130 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 ZNF841Q6ZN19 808 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 MRAP2Q96G30 205 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 LINC00479Q96M42 142 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 KIR2DL4Q99706 377 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 MRPL16Q9NX20 251 aaKnown RBP2.84□□□□□ -1.95
VMP1-216ENST00000592790 NHP2Q9NX24 153 aaKnown RBP2.84□□□□□ -1.95
VMP1-216ENST00000592790 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 RAXQ9Y2V3 346 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 PHLDA3Q9Y5J5 127 aa2.84□□□□□ -1.95
VMP1-216ENST00000592790 NCKAP5O14513 1909 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 DOPEY2Q9Y3R5 2298 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 A0A1B0GWB2 263 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 H3BTX0 84 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 H7C1H1 209 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 M0R1W7 72 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 IGLV2-8P01709 118 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 TFF1P04155 84 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 HLA-DRB4P13762 266 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 CD59P13987 128 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 ASIPP42127 132 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 BRWD1-AS2P59051 145 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 LINC00205P59089 165 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 RPL11P62913 178 aaKnown RBP2.84□□□□□ -1.96
VMP1-216ENST00000592790 WT1-ASQ06250 92 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 SRSF6Q13247 344 aaKnown RBP2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms