RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PXDC1Q5TGL8 231 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 Q8NAQ8 132 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 LINC00052Q96N35 136 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 ARL6Q9H0F7 186 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 UQCC1Q9NVA1 299 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
SMAD4-211ENST00000590499 A0A087X0K7 114 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 A8MTW9 85 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 H0YIZ8 118 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 OR5G3P0C626 314 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
SMAD4-211ENST00000590499 S100A11P31949 105 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 STX12Q86Y82 276 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 CLEC5AQ9NY25 188 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 X6R8D5 127 aa8.12□□□□□ -1.11
SMAD4-211ENST00000590499 A0A0J9YX75 114 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 UBE2L5PA0A1B0GUS4 154 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 F6UB75 175 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 CAMLGP49069 296 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 HBG1P69891 147 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 HBG2P69892 147 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 SPATA31B1PQ5VZV4 182 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 ZNF709Q8N972 641 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 CHAC2Q8WUX2 184 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
SMAD4-211ENST00000590499 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 E5RGE8 158 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 DEFB4AO15263 64 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 RBMY1A1P0DJD3 496 aaKnown RBP8.1□□□□□ -1.11
SMAD4-211ENST00000590499 RBMY1CP0DJD4 496 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 MIFP14174 115 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 NUTF2P61970 127 aaKnown RBP8.1□□□□□ -1.11
SMAD4-211ENST00000590499 CYCSP99999 105 aaKnown RBP8.1□□□□□ -1.11
SMAD4-211ENST00000590499 PMS2P11Q13670 270 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 OPCMLQ14982 345 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 RBMY1FQ15415 496 aaKnown RBP8.1□□□□□ -1.11
SMAD4-211ENST00000590499 MORN5Q5VZ52 161 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 MIC13Q5XKP0 118 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 LINC00305Q7Z4B0 112 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 S100A7AQ86SG5 101 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 C1QTNF4Q9BXJ3 329 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 RPRMQ9NS64 109 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 XCL2Q9UBD3 114 aa8.1□□□□□ -1.11
SMAD4-211ENST00000590499 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 SSNA1O43805 119 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 COX7A2P2O60397 106 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 PTTG1O95997 202 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 RPL29P47914 159 aaKnown RBP8.09□□□□□ -1.11
SMAD4-211ENST00000590499 NHLH2Q02577 135 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 RAB31Q13636 194 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 ATP6V1FQ16864 119 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 LRRC37A5PQ49AS3 106 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 FAM78BQ5VT40 261 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-211ENST00000590499 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 ZNF705AQ6ZN79 300 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-211ENST00000590499 RNF182Q8N6D2 247 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 PPP1R1CQ8WVI7 109 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 RNF126Q9BV68 326 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 RNF24Q9Y225 148 aa8.09□□□□□ -1.11
SMAD4-211ENST00000590499 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF705FA8MVS1 300 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-211ENST00000590499 MPDU1O75352 247 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 RLN2P04090 185 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF705DP0CH99 300 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF705BP0CI00 300 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-211ENST00000590499 IGLC2P0DOY2 106 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 CXCL2P19875 107 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 CXCL3P19876 107 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 FGF7P21781 194 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
SMAD4-211ENST00000590499 B2MP61769 119 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 BAXQ07812 192 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 FGL1Q08830 312 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 C10orf113Q5VZT2 155 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 EBLN2Q6P2I7 272 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 OR4B1Q8NGF8 309 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 C11orf45Q8TAV5 145 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 SLC25A31Q9H0C2 315 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 SLC35B3Q9H1N7 401 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 HRH4Q9H3N8 390 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 DNAJC4Q9NNZ3 241 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 SLC39A9Q9NUM3 307 aa8.08□□□□□ -1.12
SMAD4-211ENST00000590499 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
SMAD4-211ENST00000590499 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 MPC2O95563 127 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 CNN1P51911 297 aaKnown RBP8.07□□□□□ -1.12
SMAD4-211ENST00000590499 FXYD7P58549 80 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 PSG9Q00887 426 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms