RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TENM3Q9P273 2699 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 B5MCH6 92 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 ORM2P19652 201 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 FGF7P21781 194 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 GATA2P23769 480 aaPredicted RBP7.65□□□□□ -1.18
SDF2-208ENST00000589788 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.18
SDF2-208ENST00000589788 SELENOTP62341 195 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 RAB31Q13636 194 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 Q6ZWC4 215 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 STHQ8IWL8 128 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 BAP18Q8IXM2 172 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 OR8I2Q8N0Y5 310 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 FAM24BQ8N5W8 94 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 OR1B1Q8NGR6 318 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 MUC7Q8TAX7 377 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 SCGB1C1Q8TD33 95 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 SLC45A2Q9UMX9 530 aa7.65□□□□□ -1.18
SDF2-208ENST00000589788 C3orf84H3BNL1 204 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 SPRY2O43597 315 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 LINC00869P0C866 280 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 DEFB135Q30KP9 77 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 PSMG4Q5JS54 123 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 TMEM182Q6ZP80 229 aaPredicted RBP7.64□□□□□ -1.19
SDF2-208ENST00000589788 HSD17B11Q8NBQ5 300 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 GNPNAT1Q96EK6 184 aaPredicted RBP7.64□□□□□ -1.19
SDF2-208ENST00000589788 MGST2Q99735 147 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 PSMG3Q9BT73 122 aaPredicted RBP7.64□□□□□ -1.19
SDF2-208ENST00000589788 CSTL1Q9H114 145 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 SLC25A22Q9H936 323 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 KCNIP2Q9NS61 270 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 DOK5Q9P104 306 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 TIMM9Q9Y5J7 89 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
SDF2-208ENST00000589788 ZNF98A6NK75 572 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 C17orf112F2Z3M2 114 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 AGPAT2O15120 278 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 HYPMO75409 117 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 OR5G3P0C626 314 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 SPP1P10451 314 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 ATP6V0CP27449 155 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 ID1P41134 155 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 GALR1P47211 349 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 CAMLGP49069 296 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 EIF5AL1Q6IS14 154 aaKnown RBP7.63□□□□□ -1.19
SDF2-208ENST00000589788 S100A7AQ86SG5 101 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 PHYHIPLQ96FC7 376 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 OVOL2Q9BRP0 275 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 RSG1Q9BU20 258 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 EDA2RQ9HAV5 297 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 SEPSECSQ9HD40 501 aaKnown RBP7.63□□□□□ -1.19
SDF2-208ENST00000589788 FAM30AQ9NZY2 134 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 HIGD1AQ9Y241 93 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 TP53TG1Q9Y2A0 90 aa7.63□□□□□ -1.19
SDF2-208ENST00000589788 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 SEC11BP0C7V7 166 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 RPL29P47914 159 aaKnown RBP7.62□□□□□ -1.19
SDF2-208ENST00000589788 SERF2P84101 59 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 ACTL10Q5JWF8 245 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 SAMD13Q5VXD3 122 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 ZNF709Q8N972 641 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 OR2G3Q8NGZ4 309 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 GPR82Q96P67 336 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 SH3BGRL3Q9H299 93 aa7.62□□□□□ -1.19
SDF2-208ENST00000589788 CA1P00915 261 aaPredicted RBP7.61□□□□□ -1.19
SDF2-208ENST00000589788 PSMB3P49720 205 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 MEOX2P50222 304 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 PLP1P60201 277 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 PXDC1Q5TGL8 231 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 RNF183Q96D59 192 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 SHANK2-AS3Q9BTD1 123 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 SLC25A39Q9BZJ4 359 aaPredicted RBP7.61□□□□□ -1.19
SDF2-208ENST00000589788 SLC25A32Q9H2D1 315 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 RNF24Q9Y225 148 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
SDF2-208ENST00000589788 AGRNO00468 2067 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 H3BRN7 92 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 ISLRO14498 428 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 COX7A2P2O60397 106 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 B2MP61769 119 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 TMEM41BQ5BJD5 291 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 MIC13Q5XKP0 118 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 ZFAND6Q6FIF0 208 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 MORN3Q6PF18 240 aaPredicted RBP7.6□□□□□ -1.19
SDF2-208ENST00000589788 TRPT1Q86TN4 253 aaKnown RBP7.6□□□□□ -1.19
SDF2-208ENST00000589788 IL17DQ8TAD2 202 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 GATAD1Q8WUU5 269 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 SCRT1Q9BWW7 348 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 SLC39A9Q9NUM3 307 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 RFNGQ9Y644 331 aa7.6□□□□□ -1.19
SDF2-208ENST00000589788 UMAD1C9J7I0 102 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 IFNA7P01567 189 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 MBP02144 154 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 RPL7P18124 248 aaKnown RBP7.59□□□□□ -1.19
SDF2-208ENST00000589788 IFITM2Q01629 132 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 FFAR4Q5NUL3 377 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms