RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
ATG4D-211ENST00000589753 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 LRRC20Q8TCA0 184 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 MBD3L1Q8WWY6 194 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF586Q9NXT0 402 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 TRBV19A0A075B6N1 114 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF705EA8MWA4 302 aaPredicted RBP11.36□□□□□ -0.59
ATG4D-211ENST00000589753 SOCS3O14543 225 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 IFNA7P01567 189 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 H2AFB1P0C5Y9 115 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 NBEAP1P0C6P0 100 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 GCHFRP30047 84 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 FGF8P55075 233 aaPredicted RBP11.36□□□□□ -0.59
ATG4D-211ENST00000589753 KRTAP10-11P60412 298 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF680Q8NEM1 530 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 SFT2D1Q8WV19 159 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 C16orf92Q96LL3 132 aa11.36□□□□□ -0.59
ATG4D-211ENST00000589753 ID1P41134 155 aa11.35□□□□□ -0.59
ATG4D-211ENST00000589753 PDE6HQ13956 83 aa11.35□□□□□ -0.59
ATG4D-211ENST00000589753 IQCF2Q8IXL9 164 aa11.35□□□□□ -0.59
ATG4D-211ENST00000589753 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
ATG4D-211ENST00000589753 SAT2Q96F10 170 aaPredicted RBP11.35□□□□□ -0.59
ATG4D-211ENST00000589753 SLC50A1Q9BRV3 221 aa11.35□□□□□ -0.59
ATG4D-211ENST00000589753 SLC17A3O00476 420 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 ISLRO14498 428 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF253O75346 499 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 PSMB3P49720 205 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 CD81P60033 236 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
ATG4D-211ENST00000589753 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
ATG4D-211ENST00000589753 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF331Q9NQX6 463 aaPredicted RBP11.34□□□□□ -0.59
ATG4D-211ENST00000589753 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 UBQLN2Q9UHD9 624 aa11.34□□□□□ -0.59
ATG4D-211ENST00000589753 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 A0A1B0GV50 99 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 TEX46H3BTG2 121 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 NDUFB4O95168 129 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 CD7P09564 240 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 CMC4P56277 68 aaPredicted RBP11.33□□□□□ -0.6
ATG4D-211ENST00000589753 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 PSG9Q00887 426 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 PRR25Q96S07 402 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
ATG4D-211ENST00000589753 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 HBE1P02100 147 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 LINC00052Q96N35 136 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 MAP6D1Q9H9H5 199 aa11.32□□□□□ -0.6
ATG4D-211ENST00000589753 PKD1L1Q8TDX9 2849 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 DEFB131AP59861 70 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 RANP62826 216 aaKnown RBP11.31□□□□□ -0.6
ATG4D-211ENST00000589753 ODF3L2Q3SX64 289 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 C20orf173Q96LM9 149 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
ATG4D-211ENST00000589753 HLA-DMBP28068 263 aa11.3□□□□□ -0.6
ATG4D-211ENST00000589753 IFITM2Q01629 132 aa11.3□□□□□ -0.6
ATG4D-211ENST00000589753 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
ATG4D-211ENST00000589753 Q9H3A6 140 aa11.3□□□□□ -0.6
ATG4D-211ENST00000589753 C19orf73Q9NVV2 129 aa11.3□□□□□ -0.6
ATG4D-211ENST00000589753 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 PPT1P50897 306 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 UBE2G2P60604 165 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 CCL20P78556 96 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 ICAM4Q14773 271 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 PSG3Q16557 428 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 Q8N1Y9 231 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 ZNF738Q8NE65 137 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 PRELID1Q9Y255 219 aa11.29□□□□□ -0.6
ATG4D-211ENST00000589753 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
ATG4D-211ENST00000589753 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
ATG4D-211ENST00000589753 MRPL53Q96EL3 112 aaKnown RBP11.28□□□□□ -0.6
ATG4D-211ENST00000589753 WFDC10AQ9H1F0 79 aa11.28□□□□□ -0.6
ATG4D-211ENST00000589753 PGPA6NDG6 321 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 ZNF124Q15973 351 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 PCNPQ8WW12 178 aaKnown RBP11.27□□□□□ -0.61
ATG4D-211ENST00000589753 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
ATG4D-211ENST00000589753 AURKAIP1Q9NWT8 199 aaPredicted RBP11.27□□□□□ -0.61
ATG4D-211ENST00000589753 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
ATG4D-211ENST00000589753 ARL2-SNX15V9GYD0 113 aa11.27□□□□□ -0.61
ATG4D-211ENST00000589753 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
ATG4D-211ENST00000589753 M0R3E3 92 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 PAGE4O60829 102 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 PRB2P02812 416 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms